| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4393 |
|---|
| Symbol | |
|---|
| ID | 5367545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4992527 |
|---|
| End bp | 4993552 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806799 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001343223 |
|---|
| Protein GI | 152998388 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA ATGTTTGTAA ATTACTTTCG ACCGCTGCAA TCGCCGCAAC TATCAGCGCT
GGTGCTGCGG CGTCAACACT TGAAGATGTT AAAGCAAAAG GCTTCGTTCA ATGTGGTGTC
AGTACTGGTG TTCCAGGTTT TTCTAATGCT GATGATAAAG GTAATTGGAC TGGCTTAGAT
GTTGATGCAT GCCGTGCAGT TGCTTCCGCT ATTTTTGGTG ATGCTCAAAA AGCCAAGTTC
ACTCCCCTTT CAGCGAAAGA GCGTTTAACG GCTCTACAAT CTGGTGAAAT TGATGTTCTT
ACTCGTAACA CCACTTGGAC TTACACCCGT GACGCTTCTT TAGGTCTAGA CTTCACAGCT
GTTAACTTCT ATGACGGTCA AGGTTTCATG GTACGTAAGG ACCTAGGCGT AAAATCTGCG
ATGGATCTTG ATGGTGCAAC CGTTTGTACA GAGCAGGGTA CAACAACAGA ATTGAACATG
GCGGATTTCT TCCGTAAAAA CAAACTGTCA TACGTACCTG TTGTGGTCCA GAAAGCAGAC
GAAGCACTAG CGGCTTATGA TTCTGGCCGT TGTGACGTAT ATACAACAGA TAAATCAGGC
CTAGCGGCTC ACCGTACTAA ACTAGCCGAT CCTTCTGCTC ACGTTATTCT TCCAGAAACC
ATTTCTAAAG AGCCTCTAGC TCCTGTTGTT CGCCACGGCG ACAACCAATG GAAAGACATT
GTCACTTGGG CTTTGTTCGT GCAAGTTAAC GCAGAAGAAA TGGGTATTAC TTCTAAAAAC
GTGGCTAAAA TCAAAGCAGA AACAAACGAT CCAAGCATTA AACGCCTACT AGGTGTTGAA
GGTGATATGG GATCTCAGCT AGGTCTTCCT GCTGATTGGG CCTATAACAT TATCGCTAAG
GTAGGCAACT ACGGTGAAGT GTTTGAGCGC AACATTGGTC CATCAACGCC TTTAGATATT
CCACGTGGCC TTAATGCACT ATGGACTGAA GCTGGCGGTA TCATGTACGC GCCACCAGTT
CGTTAA
|
|---|
| Protein sequence | MKSNVCKLLS TAAIAATISA GAAASTLEDV KAKGFVQCGV STGVPGFSNA DDKGNWTGLD
VDACRAVASA IFGDAQKAKF TPLSAKERLT ALQSGEIDVL TRNTTWTYTR DASLGLDFTA
VNFYDGQGFM VRKDLGVKSA MDLDGATVCT EQGTTTELNM ADFFRKNKLS YVPVVVQKAD
EALAAYDSGR CDVYTTDKSG LAAHRTKLAD PSAHVILPET ISKEPLAPVV RHGDNQWKDI
VTWALFVQVN AEEMGITSKN VAKIKAETND PSIKRLLGVE GDMGSQLGLP ADWAYNIIAK
VGNYGEVFER NIGPSTPLDI PRGLNALWTE AGGIMYAPPV R
|
|---|
| |