Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4361 |
Symbol | |
ID | 5365697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4954026 |
End bp | 4954745 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640806767 |
Product | ribonuclease PH |
Protein accession | YP_001343191 |
Protein GI | 152998356 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.889932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00892611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCCAA GCGGAAGAGA AGCAGATCAA TTACGTCCAC TTAAAATCAC ACGTAATTTT ACCAAACATG CCGAAGGCTC GGTGCTGATC GAATGTGGCG ACACGAAAGT TATTTGTACT GCGACTGTGG TTTCTGGTGT GCCGCGTTTT TTGAAAGGCA AGGGCCAAGG TTGGATCACA GCGGAATACG GTATGTTGCC TCGTTCTACA CACAGCCGTA TGGATCGTGA AGCGGCTCGC GGTAAGCAAG GCGGCCGTAC GGTTGAGATT CAGCGTTTGA TTGGCCGTTC TTTGCGCGCG GCTGTGGATC TTAAAAAATT GGGCGAGAAC ACGATCACTA TTGACTGTGA CGTGATTCAA GCCGACGGCG GTACTCGTAC AGCATCTATC ACTGGCGGCT TTGTTGCTTT GGCTGATGCT ATGCGTGTAT TGGTTGAGAA CAAAAAAGTA AAAGAGAATC CAATCGTGTC ACAAATTGCT GCGATTTCTG TGGGTGTCTA CAAAGGCGTT CCAGTATTGG ATTTGGATTA CCCAGAAGAT TCTAATGCCG AAACGGACAT GAACGTCATC ATGAACGACA AAGGTGGCTT CATTGAGATC CAAGGTACAG CAGAAGGCGA AGCATTCAGC GACGAGCATA TGATGGGCAT GTTGGCAGTG GCTCGTAAAG GCATTGCAGA AATTATGGAA GCACAGCGTG CGGCCTTGTT CGACAAATAA
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Protein sequence | MRPSGREADQ LRPLKITRNF TKHAEGSVLI ECGDTKVICT ATVVSGVPRF LKGKGQGWIT AEYGMLPRST HSRMDREAAR GKQGGRTVEI QRLIGRSLRA AVDLKKLGEN TITIDCDVIQ ADGGTRTASI TGGFVALADA MRVLVENKKV KENPIVSQIA AISVGVYKGV PVLDLDYPED SNAETDMNVI MNDKGGFIEI QGTAEGEAFS DEHMMGMLAV ARKGIAEIME AQRAALFDK
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