Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4359 |
Symbol | |
ID | 5366178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4950521 |
End bp | 4952935 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640806765 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001343189 |
Protein GI | 152998354 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.161246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00406944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTACCAC TGCACAAACG TCTATCTTAC AAACAAGCTA AATGGGCATT AGTGCTGATA TTGTTGCTTA GTCTGTCGAT GAGTACTTTT CAAATTTTTA TTGATTGGCA GGATGAAAAA GCCACTATCC AGAATCAAGT CATGTCGACT TTACATATTG TCGAAAATGC CGCGACGGAA GCGGCATATT CTTTAGATGA AGAGCTAGCT AAAAAAGTAC TGACTGGATT AATGCATTCA AACAGTTTTT ATAAAGCGCG CTTGGAAGAT GATTTAGGTA CTGAATTAGC AAGTACATAT CGCTCTTTAG ACCCTTTGTC GTTACGTTGG TTATCTGAAA AAGTATTTAG CGGTTTACCT CAACACTTTA GTTTGCCATT GATGCGTAAC AACCATTTGT CTGTTGGAAC TCTTATGGTA ACCATTGACA GCGGTACGGT AACCAATAGC TTTATCCGTC GCAATATTCG GTTAATAACA ACGTCATTAA TATCGGCCTT TTTACTGGGT GCAGCGATGT TTATGCTGTT TTATGTGCAG ATATCGCATC CACTATCACG ACTAATTGAT CAATTGGGCC AGTTAGAAAG AGAAGATAAT GATCCCGCAC AGTTGAAATT TAAACAAACG GCTCGAGAGG ATGAATTAGG GATTTTAGCC CGTACTATTA CCGCGCTTTG GCATAAGCGG AAGAAGGTCG AAACTGAGCT GGCGAAAAGC GAGGCGTACT TTAAAGCGGT TTTGCATCAG TCCAGTGAAT GTATGTTGCT GACGAACTTG AAAGGCCAGA TATTAGATTG TAATAGCGAG ACGTGCCGTT TATTAGCTTA CGATAAGCCC ACTTTATTAA TGTTAACCAT TCAAGATATT GATCCTGAGC AAACGCCTAA TTTACTTAGA GAGTGGGCGG ATAATTCACT GGGTGATCCC AAAATATTTG AAGCGCACTA TCATCGCAGT AGTGGTGTAA GTTTTCCGGT TGAAGTGTGC GGAAACATTA TTACGCTGGA TCATGAGGCG CATTTTTTGG CATCTTTTCG GGATATTACA CAACGTAAAT TAGACCAAGA ACAGGTTAAG TTTTTGGCTT ATTACGATGC CTTGACCAAT TTGCCTAATC GACGATTTTT AAATCAGAAT ATCGAGAAAG TCATCACCAC GGCGCAGAAT AATGGCTATA TTGGTGGCTT GTTGTTTATC GATTTGGATC GCTTTAAAAA TATCAATGAT TCCATGGGGC ATCACGTTGG TGATGCGCTT TTGGTGGAAG CCTCAAAACG TATTCTAGCC TGTTTGTCAC AAGCTGATAT TGCGGTCCGC ATGGGCGGTG ATGAATTTGT GTTATTGATT CCTGTATTGG GAGATAACGC CGAAGAAGCT CAAAGCAGAG TCACTTTATT GGCAGAAACC TTGCTGTCAC AGCTATGTCA GGTGTTTCGT TTAGAGCAAA CGGATTTATT TATCTCTGCG AGTATTGGTA TTAGTTTGTT TCCTTTTGAT GGTGCGAATG ATGCGCAGAT ATTACGTCAA GCTGATACTG CCATGTACGA AGCGAAAGAA AGTGGCCGTA ATGCATACCG TTTTTATCGA CAAGAAATGC AGCAGCAAGT TGCCGAGCGA GCTGCGTTAG AAAAAGCTCT ACACCGTGCG ATTAGCAACG ATGAGTTTTA TTTAGTTTAT CAGCCTCAAG TGAATGAGCA TGGCCAATTG ATAGGCTTTG AAGCACTCAT TCGTTGGAGT AATGAAGAGC TGGGATTAGT GCCGCCAAAT CGTTTTATTC CAATAGCGGA AGAAATTGGT TTAATTTACG ACGTTGGAAA CTGGGTTCTA GAAAATGTCT GTCAGCAATT AAAGGCGTGG CAAGATATTG GCCTTCCGCC GACATTTAAA GGTGTGGCGA TAAACATCAG CCCGTATCAG TTTGCCAAGG AGTGCTTTGT TGAAAGCGTC TGCGATGTGA TCGACCGGAC TCAAGTGGAC TCAAGCTTGC TCGATTTAGA AATCACCGAA GGTATGTTGG TCGAAAATAT TGCTTCTGTT GCTGAGAAAA TGTGGCGACT TAAAGAGCAT AATATCCGTT TTTCTATTGA TGACTTTGGA ACTGGGTATT CTTCGCTGCG CTATTTACAG CATTTTCCTA TTAACCAGCT AAAAATTGAT CAGTCGTTTG TTCGAGATCT GACTAGCGAT CCTCAGAGTC ATGTCATTAT TAATACGATA GTGTCTATGG CGACACATAT GAACTTGTCA GTACTTGCAG AAGGCGTAGA GCATCAGGTA GAAAAAGACA TTCTGGAAAA CATGGGCTGC GCGAAATATC AGGGTTATTT TTTCTCTAAA CCTGTAAAAG CTGATACGGC AACTCAATAT CTCTCTAGCG ATATCACTTT TCCGTTACAT CACCAAAACG TTTAA
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Protein sequence | MLPLHKRLSY KQAKWALVLI LLLSLSMSTF QIFIDWQDEK ATIQNQVMST LHIVENAATE AAYSLDEELA KKVLTGLMHS NSFYKARLED DLGTELASTY RSLDPLSLRW LSEKVFSGLP QHFSLPLMRN NHLSVGTLMV TIDSGTVTNS FIRRNIRLIT TSLISAFLLG AAMFMLFYVQ ISHPLSRLID QLGQLEREDN DPAQLKFKQT AREDELGILA RTITALWHKR KKVETELAKS EAYFKAVLHQ SSECMLLTNL KGQILDCNSE TCRLLAYDKP TLLMLTIQDI DPEQTPNLLR EWADNSLGDP KIFEAHYHRS SGVSFPVEVC GNIITLDHEA HFLASFRDIT QRKLDQEQVK FLAYYDALTN LPNRRFLNQN IEKVITTAQN NGYIGGLLFI DLDRFKNIND SMGHHVGDAL LVEASKRILA CLSQADIAVR MGGDEFVLLI PVLGDNAEEA QSRVTLLAET LLSQLCQVFR LEQTDLFISA SIGISLFPFD GANDAQILRQ ADTAMYEAKE SGRNAYRFYR QEMQQQVAER AALEKALHRA ISNDEFYLVY QPQVNEHGQL IGFEALIRWS NEELGLVPPN RFIPIAEEIG LIYDVGNWVL ENVCQQLKAW QDIGLPPTFK GVAINISPYQ FAKECFVESV CDVIDRTQVD SSLLDLEITE GMLVENIASV AEKMWRLKEH NIRFSIDDFG TGYSSLRYLQ HFPINQLKID QSFVRDLTSD PQSHVIINTI VSMATHMNLS VLAEGVEHQV EKDILENMGC AKYQGYFFSK PVKADTATQY LSSDITFPLH HQNV
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