| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4359 |
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| Symbol | |
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| ID | 5366178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4950521 |
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| End bp | 4952935 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640806765 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001343189 |
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| Protein GI | 152998354 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.161246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00406944 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTACCAC TGCACAAACG TCTATCTTAC AAACAAGCTA AATGGGCATT AGTGCTGATA
TTGTTGCTTA GTCTGTCGAT GAGTACTTTT CAAATTTTTA TTGATTGGCA GGATGAAAAA
GCCACTATCC AGAATCAAGT CATGTCGACT TTACATATTG TCGAAAATGC CGCGACGGAA
GCGGCATATT CTTTAGATGA AGAGCTAGCT AAAAAAGTAC TGACTGGATT AATGCATTCA
AACAGTTTTT ATAAAGCGCG CTTGGAAGAT GATTTAGGTA CTGAATTAGC AAGTACATAT
CGCTCTTTAG ACCCTTTGTC GTTACGTTGG TTATCTGAAA AAGTATTTAG CGGTTTACCT
CAACACTTTA GTTTGCCATT GATGCGTAAC AACCATTTGT CTGTTGGAAC TCTTATGGTA
ACCATTGACA GCGGTACGGT AACCAATAGC TTTATCCGTC GCAATATTCG GTTAATAACA
ACGTCATTAA TATCGGCCTT TTTACTGGGT GCAGCGATGT TTATGCTGTT TTATGTGCAG
ATATCGCATC CACTATCACG ACTAATTGAT CAATTGGGCC AGTTAGAAAG AGAAGATAAT
GATCCCGCAC AGTTGAAATT TAAACAAACG GCTCGAGAGG ATGAATTAGG GATTTTAGCC
CGTACTATTA CCGCGCTTTG GCATAAGCGG AAGAAGGTCG AAACTGAGCT GGCGAAAAGC
GAGGCGTACT TTAAAGCGGT TTTGCATCAG TCCAGTGAAT GTATGTTGCT GACGAACTTG
AAAGGCCAGA TATTAGATTG TAATAGCGAG ACGTGCCGTT TATTAGCTTA CGATAAGCCC
ACTTTATTAA TGTTAACCAT TCAAGATATT GATCCTGAGC AAACGCCTAA TTTACTTAGA
GAGTGGGCGG ATAATTCACT GGGTGATCCC AAAATATTTG AAGCGCACTA TCATCGCAGT
AGTGGTGTAA GTTTTCCGGT TGAAGTGTGC GGAAACATTA TTACGCTGGA TCATGAGGCG
CATTTTTTGG CATCTTTTCG GGATATTACA CAACGTAAAT TAGACCAAGA ACAGGTTAAG
TTTTTGGCTT ATTACGATGC CTTGACCAAT TTGCCTAATC GACGATTTTT AAATCAGAAT
ATCGAGAAAG TCATCACCAC GGCGCAGAAT AATGGCTATA TTGGTGGCTT GTTGTTTATC
GATTTGGATC GCTTTAAAAA TATCAATGAT TCCATGGGGC ATCACGTTGG TGATGCGCTT
TTGGTGGAAG CCTCAAAACG TATTCTAGCC TGTTTGTCAC AAGCTGATAT TGCGGTCCGC
ATGGGCGGTG ATGAATTTGT GTTATTGATT CCTGTATTGG GAGATAACGC CGAAGAAGCT
CAAAGCAGAG TCACTTTATT GGCAGAAACC TTGCTGTCAC AGCTATGTCA GGTGTTTCGT
TTAGAGCAAA CGGATTTATT TATCTCTGCG AGTATTGGTA TTAGTTTGTT TCCTTTTGAT
GGTGCGAATG ATGCGCAGAT ATTACGTCAA GCTGATACTG CCATGTACGA AGCGAAAGAA
AGTGGCCGTA ATGCATACCG TTTTTATCGA CAAGAAATGC AGCAGCAAGT TGCCGAGCGA
GCTGCGTTAG AAAAAGCTCT ACACCGTGCG ATTAGCAACG ATGAGTTTTA TTTAGTTTAT
CAGCCTCAAG TGAATGAGCA TGGCCAATTG ATAGGCTTTG AAGCACTCAT TCGTTGGAGT
AATGAAGAGC TGGGATTAGT GCCGCCAAAT CGTTTTATTC CAATAGCGGA AGAAATTGGT
TTAATTTACG ACGTTGGAAA CTGGGTTCTA GAAAATGTCT GTCAGCAATT AAAGGCGTGG
CAAGATATTG GCCTTCCGCC GACATTTAAA GGTGTGGCGA TAAACATCAG CCCGTATCAG
TTTGCCAAGG AGTGCTTTGT TGAAAGCGTC TGCGATGTGA TCGACCGGAC TCAAGTGGAC
TCAAGCTTGC TCGATTTAGA AATCACCGAA GGTATGTTGG TCGAAAATAT TGCTTCTGTT
GCTGAGAAAA TGTGGCGACT TAAAGAGCAT AATATCCGTT TTTCTATTGA TGACTTTGGA
ACTGGGTATT CTTCGCTGCG CTATTTACAG CATTTTCCTA TTAACCAGCT AAAAATTGAT
CAGTCGTTTG TTCGAGATCT GACTAGCGAT CCTCAGAGTC ATGTCATTAT TAATACGATA
GTGTCTATGG CGACACATAT GAACTTGTCA GTACTTGCAG AAGGCGTAGA GCATCAGGTA
GAAAAAGACA TTCTGGAAAA CATGGGCTGC GCGAAATATC AGGGTTATTT TTTCTCTAAA
CCTGTAAAAG CTGATACGGC AACTCAATAT CTCTCTAGCG ATATCACTTT TCCGTTACAT
CACCAAAACG TTTAA
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| Protein sequence | MLPLHKRLSY KQAKWALVLI LLLSLSMSTF QIFIDWQDEK ATIQNQVMST LHIVENAATE
AAYSLDEELA KKVLTGLMHS NSFYKARLED DLGTELASTY RSLDPLSLRW LSEKVFSGLP
QHFSLPLMRN NHLSVGTLMV TIDSGTVTNS FIRRNIRLIT TSLISAFLLG AAMFMLFYVQ
ISHPLSRLID QLGQLEREDN DPAQLKFKQT AREDELGILA RTITALWHKR KKVETELAKS
EAYFKAVLHQ SSECMLLTNL KGQILDCNSE TCRLLAYDKP TLLMLTIQDI DPEQTPNLLR
EWADNSLGDP KIFEAHYHRS SGVSFPVEVC GNIITLDHEA HFLASFRDIT QRKLDQEQVK
FLAYYDALTN LPNRRFLNQN IEKVITTAQN NGYIGGLLFI DLDRFKNIND SMGHHVGDAL
LVEASKRILA CLSQADIAVR MGGDEFVLLI PVLGDNAEEA QSRVTLLAET LLSQLCQVFR
LEQTDLFISA SIGISLFPFD GANDAQILRQ ADTAMYEAKE SGRNAYRFYR QEMQQQVAER
AALEKALHRA ISNDEFYLVY QPQVNEHGQL IGFEALIRWS NEELGLVPPN RFIPIAEEIG
LIYDVGNWVL ENVCQQLKAW QDIGLPPTFK GVAINISPYQ FAKECFVESV CDVIDRTQVD
SSLLDLEITE GMLVENIASV AEKMWRLKEH NIRFSIDDFG TGYSSLRYLQ HFPINQLKID
QSFVRDLTSD PQSHVIINTI VSMATHMNLS VLAEGVEHQV EKDILENMGC AKYQGYFFSK
PVKADTATQY LSSDITFPLH HQNV
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