| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4346 |
|---|
| Symbol | |
|---|
| ID | 5366705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4934952 |
|---|
| End bp | 4935923 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640806752 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001343176 |
|---|
| Protein GI | 152998341 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.126881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA AAGTAATGGC GTTCGGCGAA GCCTTGATCG ATTTCCTTTC TAATGGAGCA
ACCAAAGCAG GAGAGCTTGA ATCTTTTACT AAGTTCCCTG GCGGTGCGCC AGCAAACGTT
GCGGTAGCTG TGGCACGTTT AGGTGGCAAC AGTCATTTTG TCGGCCAAGT AGGTGACGAT
GCGTTTGGTC ATTTTTTGAA AGAGTCTCTT GATGGTTACG GTGTGAATAC GAGCAATATG
CTGATGACCA AGGAAGCCAA AACGGCCTTG GCGTTTGTAA GCTTAGATCA AACTGGCGAA
CGTAGCTTTG AATTTTACCG CAGTCCTTCT GCGGATATTT TGTTCCGCGA AAGTGATTTT
GATGCCACTT GGTTTGCTGA TAGCCAAGGA GTGTTTCATA CCTGTTCTAA TACATTGACC
GATGCGGATA TTACCAAAGC TACTTTGGCT GGAGTGAGCA TGGCTCGTGC GGAAAACTGG
ATCGTCAGCA TTGATGTGAA CTTGCGTATG AACCTTTGGC CGAATGGGCA AGTGGATATT
AAGCGTGTTA TTGATTGGAT GCAAAGTGGT GATGTAGTGA AAGCCAGTCT AGAAGAATTG
GCAGTGTTAG CAGAAGATCC ATTTGCTCTT ATCGAACAAT CTCTTGCTGC GGGTGTGACC
TTATTTGTAT TAACGGATGG TGGCAACCCG ATTCGTTTTT ATACGGCGAC TCATGGCGTA
AGTGAAGTGA TTACGCCAAA AGTGGAAGTA AAAGACACCA CTGCAGCAGG CGATGCTTTT
GTTGGCGGCT TGCTTTATAA ATTGGCAGAA CAAGGTGGCG ATCGCGCAGC GTTAGCGGCT
TTATCTCAAC AGCAGCTAGT GGATATTGTG CGCTTTGCTG CGGCTTGTGG TGCAGATTCT
GTGACAAAGC TGGGTGCCTA TCCTTCTTTG CCTTCGTTGA GCGAAGCTGA AGCGCAGTTA
AGCCAGTTTT AA
|
|---|
| Protein sequence | MTTKVMAFGE ALIDFLSNGA TKAGELESFT KFPGGAPANV AVAVARLGGN SHFVGQVGDD
AFGHFLKESL DGYGVNTSNM LMTKEAKTAL AFVSLDQTGE RSFEFYRSPS ADILFRESDF
DATWFADSQG VFHTCSNTLT DADITKATLA GVSMARAENW IVSIDVNLRM NLWPNGQVDI
KRVIDWMQSG DVVKASLEEL AVLAEDPFAL IEQSLAAGVT LFVLTDGGNP IRFYTATHGV
SEVITPKVEV KDTTAAGDAF VGGLLYKLAE QGGDRAALAA LSQQQLVDIV RFAAACGADS
VTKLGAYPSL PSLSEAEAQL SQF
|
|---|
| |