Gene Mmwyl1_4322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_4322 
Symbol 
ID5367668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4905411 
End bp4906916 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content43% 
IMG OID640806728 
ProductTolC family type I secretion outer membrane protein 
Protein accessionYP_001343152 
Protein GI152998317 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.811491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATC GAATAGTTTT GACTTGCACG GTTTATATAG GGGTAGCCCT TCTACCAGCA 
ATAGCGCATG CAATCACTCT CGAAGAAGCG ACATATACGG CAATAGAAAA CAATCCTGCT
GTAAGACAAG CTGTCGCAAA ATATCGAGAG TCCAAAGAAA ATGCAGATAT TGCTCGTCGC
TCTGGCTATT ATCCAAGCGT GGATCTTTCC GCAGGCATAG GCCGAGAAAC AACTTACGCC
GACAATAGCA AACCGAATGA TATTGATCTT ACTCGTCGCG AACTGAAACT TTCGCTGAAC
CAGCCATTAT TTAACGGTTT TTCAACAAAA AATGAGATAG AACGATTAAA CAGCGAGGCG
GAAGCCGATC GTTGGAGCGC ACTAATTTCT GTTGAGAATA CAGCCCTAGA AGTGGCTCAG
GTTTATGCTA ACATTCTACG TTACAGAGAG CTTGTCGGCC TTGCCGAACT GAACTTAAAA
ACCCATGAGC GAATTTATGG ACAAATTAAA TTAAAAAGCG ACTCAGGTAT TGGGCGTCAA
TCTGATCTTA GCCAAATAAC CGCACGCCTC GCTAAGGCCC ATGCCAATCA CTTTGCTGCA
ATCAATAATC TCCAAGATGC CGAAAGTAAC TACAAAAATA TTGTCGGAGA AATGCCGCCG
GAAGATTTAA TCTATCCGAT GCCAGATAAA GACTTGCTAC CAAAAAACCT TGAGTCGGCA
ATCAATGAAT CATTAAAGAA AAATCCGGCA ATTGAAGGTG CACGATGGGA CGTTGCTGCA
ACAGAAAGCT CTCAAAAAAT TGCCGATGCA GACAAATATC CAACGATTAG TTTTGGCTTA
GAGCGCACAT GGAACAACAA TATAGATGGT GATAGAGGCC CAAGCGAAGA TTTATTAGCC
ATGGTGCGGT TGAACTACAA TCTTTATAGC GGTGGCACAC ACAAACGCAA ACAAGAAGTT
GCCGTTCAAC AGAACCTCCA AGCGTCTGAA ATACGCCGTA ACACAATAAG AGATACTGAA
CTCACTGTGC GATTAGCTTG GGCAGCGTTT GAAGCGACCA CAGGTCAAAA AGAACAAATT
CGTAAATATG TCATTGCGAC AAAAGAATCA CAAATTGCTT ACGAAAAACA ATTTCGCTTA
GGCCGCCGTA CTTTACTTGA TGTATTAGAT AGTGAAAACG AACTTTTCCA AGCACGCCAA
GATTATGTGA ATGCGGACTA CGATGAACTT TTTTCAGAAT TCCGTTTATT TAACGCTAAA
GGTGAACTTA TGCGCGCATT CCGTATTTAT CGCCCGCAAC TCCTTGGTTT TAATGACGAA
TTTGATAAGG CAAAAATACC TCCAACCCCA GAACCTAGCG CAACAGAAGA GCTGAAAGCA
GCTGAAAGTA CGGTGAAAGT TGATGATGTC TCCCTGTCAC CTGAGGCTCC ACCTGTGGAC
GACTCAGAGA AAGCACAAGA AAGTGAGCTA TTCTTAGACG CTAATGGAAA CACTGGAAAC
TGGTAG
 
Protein sequence
MFNRIVLTCT VYIGVALLPA IAHAITLEEA TYTAIENNPA VRQAVAKYRE SKENADIARR 
SGYYPSVDLS AGIGRETTYA DNSKPNDIDL TRRELKLSLN QPLFNGFSTK NEIERLNSEA
EADRWSALIS VENTALEVAQ VYANILRYRE LVGLAELNLK THERIYGQIK LKSDSGIGRQ
SDLSQITARL AKAHANHFAA INNLQDAESN YKNIVGEMPP EDLIYPMPDK DLLPKNLESA
INESLKKNPA IEGARWDVAA TESSQKIADA DKYPTISFGL ERTWNNNIDG DRGPSEDLLA
MVRLNYNLYS GGTHKRKQEV AVQQNLQASE IRRNTIRDTE LTVRLAWAAF EATTGQKEQI
RKYVIATKES QIAYEKQFRL GRRTLLDVLD SENELFQARQ DYVNADYDEL FSEFRLFNAK
GELMRAFRIY RPQLLGFNDE FDKAKIPPTP EPSATEELKA AESTVKVDDV SLSPEAPPVD
DSEKAQESEL FLDANGNTGN W