Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4322 |
Symbol | |
ID | 5367668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 4905411 |
End bp | 4906916 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640806728 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001343152 |
Protein GI | 152998317 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.811491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATC GAATAGTTTT GACTTGCACG GTTTATATAG GGGTAGCCCT TCTACCAGCA ATAGCGCATG CAATCACTCT CGAAGAAGCG ACATATACGG CAATAGAAAA CAATCCTGCT GTAAGACAAG CTGTCGCAAA ATATCGAGAG TCCAAAGAAA ATGCAGATAT TGCTCGTCGC TCTGGCTATT ATCCAAGCGT GGATCTTTCC GCAGGCATAG GCCGAGAAAC AACTTACGCC GACAATAGCA AACCGAATGA TATTGATCTT ACTCGTCGCG AACTGAAACT TTCGCTGAAC CAGCCATTAT TTAACGGTTT TTCAACAAAA AATGAGATAG AACGATTAAA CAGCGAGGCG GAAGCCGATC GTTGGAGCGC ACTAATTTCT GTTGAGAATA CAGCCCTAGA AGTGGCTCAG GTTTATGCTA ACATTCTACG TTACAGAGAG CTTGTCGGCC TTGCCGAACT GAACTTAAAA ACCCATGAGC GAATTTATGG ACAAATTAAA TTAAAAAGCG ACTCAGGTAT TGGGCGTCAA TCTGATCTTA GCCAAATAAC CGCACGCCTC GCTAAGGCCC ATGCCAATCA CTTTGCTGCA ATCAATAATC TCCAAGATGC CGAAAGTAAC TACAAAAATA TTGTCGGAGA AATGCCGCCG GAAGATTTAA TCTATCCGAT GCCAGATAAA GACTTGCTAC CAAAAAACCT TGAGTCGGCA ATCAATGAAT CATTAAAGAA AAATCCGGCA ATTGAAGGTG CACGATGGGA CGTTGCTGCA ACAGAAAGCT CTCAAAAAAT TGCCGATGCA GACAAATATC CAACGATTAG TTTTGGCTTA GAGCGCACAT GGAACAACAA TATAGATGGT GATAGAGGCC CAAGCGAAGA TTTATTAGCC ATGGTGCGGT TGAACTACAA TCTTTATAGC GGTGGCACAC ACAAACGCAA ACAAGAAGTT GCCGTTCAAC AGAACCTCCA AGCGTCTGAA ATACGCCGTA ACACAATAAG AGATACTGAA CTCACTGTGC GATTAGCTTG GGCAGCGTTT GAAGCGACCA CAGGTCAAAA AGAACAAATT CGTAAATATG TCATTGCGAC AAAAGAATCA CAAATTGCTT ACGAAAAACA ATTTCGCTTA GGCCGCCGTA CTTTACTTGA TGTATTAGAT AGTGAAAACG AACTTTTCCA AGCACGCCAA GATTATGTGA ATGCGGACTA CGATGAACTT TTTTCAGAAT TCCGTTTATT TAACGCTAAA GGTGAACTTA TGCGCGCATT CCGTATTTAT CGCCCGCAAC TCCTTGGTTT TAATGACGAA TTTGATAAGG CAAAAATACC TCCAACCCCA GAACCTAGCG CAACAGAAGA GCTGAAAGCA GCTGAAAGTA CGGTGAAAGT TGATGATGTC TCCCTGTCAC CTGAGGCTCC ACCTGTGGAC GACTCAGAGA AAGCACAAGA AAGTGAGCTA TTCTTAGACG CTAATGGAAA CACTGGAAAC TGGTAG
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Protein sequence | MFNRIVLTCT VYIGVALLPA IAHAITLEEA TYTAIENNPA VRQAVAKYRE SKENADIARR SGYYPSVDLS AGIGRETTYA DNSKPNDIDL TRRELKLSLN QPLFNGFSTK NEIERLNSEA EADRWSALIS VENTALEVAQ VYANILRYRE LVGLAELNLK THERIYGQIK LKSDSGIGRQ SDLSQITARL AKAHANHFAA INNLQDAESN YKNIVGEMPP EDLIYPMPDK DLLPKNLESA INESLKKNPA IEGARWDVAA TESSQKIADA DKYPTISFGL ERTWNNNIDG DRGPSEDLLA MVRLNYNLYS GGTHKRKQEV AVQQNLQASE IRRNTIRDTE LTVRLAWAAF EATTGQKEQI RKYVIATKES QIAYEKQFRL GRRTLLDVLD SENELFQARQ DYVNADYDEL FSEFRLFNAK GELMRAFRIY RPQLLGFNDE FDKAKIPPTP EPSATEELKA AESTVKVDDV SLSPEAPPVD DSEKAQESEL FLDANGNTGN W
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