| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4310 |
|---|
| Symbol | |
|---|
| ID | 5368108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4888700 |
|---|
| End bp | 4889929 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640806715 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001343140 |
|---|
| Protein GI | 152998305 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.08213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA ACTCACTAGA CAAAGACAAA ATCAAAATCT TGTTATTAGA AGGCGTTCAT
CAATCTGCAT TGGATGCATT GCATGACGCA GGCTATACCA ACATTGAATA CCACAAAACT
GCATTAGCAG AAGATGAGCT GATTGAGAAA ATCTCGGAAG CACATTTCAT TGGTATTCGA
TCTCGTACTC AGTTAACTGC GAATGTTTTA GAACATGCTA ACAAACTTGC GGCCATTGGT
TGTTTTTGTA TTGGGACAAA CCAAGTAGAT CTCGATGCGG CAAGTGAGAA AGGTATTGTT
GTCTTCAACG CGCCATACTC AAATACTCGT AGTGTTGCCG AGTTGGTTCT TGGTCAGTTG
ATTCTATTGC TTCGAGGCAT TCCTGCGAAA AACGCGGCAT GTCATCGTGG TGGTTGGATT
AAGTCTGCTG CGGGCTCTTT CGAAACTCGT GGTAAGCGTT TAGGTATTAT TGGTTATGGC
AGCATTGGTA CTCAATTGAG TGTTTTGGCT GAATCGTTAG GCATGGAAGT GTGTTTTTAC
GATATCGTCA CCAAATTACC ATTGGGCAAT GCGCGTCAAA TTAAGAGCCT GAAAGAATTG
CTATCTACCA GTGATATTAT CAGCTTGCAT GTGCCAGAAA CCAATTCCAC TAAGATGATG
ATTGGTGCGA AAGAAGTTTC TCAAATTAAG AAAGGTGCTA TCTTCATCAA TGCTTCACGC
GGAACAGTTG CTGATCTTGA TGCAGTGGCT GAGGCGATCA AGTCTGGAAA TCTAGGTGGC
GCAGCTGTTG ACGTATTCCC TGTTGAGCCT AAAGGCAACG ATGAAGAATT CGTATCACCA
CTACGTGGTT TAGACAATGT GATTCTAACG CCTCATATCG GCGGTAGCAC AATGGAAGCG
CAAGAAAACA TCGGTATTGA AGTGGCTGAG AAGCTTATTA AATATTCTGA TGTTGGTACT
ACTACTGCGG CGGTGAATTT CCCAGAAGTA GCATTGCCTG CACAAGCTGA TAACCACCGT
ATTCTTCACA TTCATGAAAA CCGTCCTGGT GTGCTTTCTA AGATCAACGC GATCTTTTCT
GAAAACAACA TTAACATTAC AGGCCAGTAC CTTCGTACCA CGGAGAAACT TGGCTATATG
GTAATGGATG TGGATGCAGA AGAGGGCGAA TTGGCGCTTG AGAAAGTGAG AGAAGTGGAA
GGAACTATTA AAGCGCGCGT TTTGTTTTAA
|
|---|
| Protein sequence | MSNNSLDKDK IKILLLEGVH QSALDALHDA GYTNIEYHKT ALAEDELIEK ISEAHFIGIR
SRTQLTANVL EHANKLAAIG CFCIGTNQVD LDAASEKGIV VFNAPYSNTR SVAELVLGQL
ILLLRGIPAK NAACHRGGWI KSAAGSFETR GKRLGIIGYG SIGTQLSVLA ESLGMEVCFY
DIVTKLPLGN ARQIKSLKEL LSTSDIISLH VPETNSTKMM IGAKEVSQIK KGAIFINASR
GTVADLDAVA EAIKSGNLGG AAVDVFPVEP KGNDEEFVSP LRGLDNVILT PHIGGSTMEA
QENIGIEVAE KLIKYSDVGT TTAAVNFPEV ALPAQADNHR ILHIHENRPG VLSKINAIFS
ENNINITGQY LRTTEKLGYM VMDVDAEEGE LALEKVREVE GTIKARVLF
|
|---|
| |