| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4308 |
|---|
| Symbol | |
|---|
| ID | 5366104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4885177 |
|---|
| End bp | 4886286 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806713 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001343138 |
|---|
| Protein GI | 152998303 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00256094 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTT CCCGTCGCCA ATTCGTGAAA GGCGCCTCTA TCGCAGGTGC TGTTGCCGCT
ACCCCGTTTT CCATTAATAA AGCCATTGCC GCTAATAAAG AGCTACGTAT TTATGCGTGG
GCTGGTTACA TTACCGATGA AATGCTAGCG GATTTTAAAG CCAAAACGGG CATTAATGCT
ACGTTTACGC CATATGGCAC CAACGATGAG TTGATGAACT CTCTACGAGC TACAGATGGA
ACAGGCTTTG ATATTATTAT GCCGACTGTT GACCGCGTAC CAGGTTATGT CGACTACGAG
CTTGTACAGC CTCTTGATGT TAAAAGAATT AAATGGAGTG GTTGTTTAGA AAGCGCGCTG
TCAGGATCAG ATGTTGGTGG GATTGTAAAA GGTAAGCGTT ATTTTGCACC ATCGGATTGG
GGTACGGAAG CGATTGCTTA CAATAAGAAT GATGCAAAAA TCAGTAAAGA GCTAAGCTAC
GGCGATCTTT GGTTACCTGA AAACTCTGGT GGCGTAACGG TTCGAGGCCA CTCAGCTCTT
GTTGGTATTG GTCTGTGGTT AGAAAAAGCG GGTAAGCTTC CTTATCCATT GCTAGATTCC
TATAAAACCG AAAAAGCCAT GCGTGCGAAT TTCGATGTTA TTCTGAAAAC TGCGGTTGAA
CATAAAGGTG CGATTGCTCA GTTCTGGTCT ACAGAAAATG AAGCACAAGG TGCCTTCCGG
ACTAATGGCG CTATCATAGG TCAAACTTGG GACAGCACCG CGTTTAAACT GCAATCCGAA
GGGGAACCTA TTGCCTATGG CGCACCAAAA GAAGGTGCGT TGGCTTGGAT GGAAGGATTT
GTTATTCCAA AGAATGCGAA TAATGTGGAT TCGGTATATG AATTCATTAA TTGGTATTAC
ACGCCAGAAG CGGGCGCTAT GTTCGTCAAA GCGACAGGAT ACAACTCCAC GGCGAAAGGT
GCCGATGCTC TATTGCCAGC GGAAACTAAG CAGTTTTTCC AAGACTCTTA CAGTAAACAA
GATCTTGCCA ATCTTTGGTG GTGGCCAATC CAAGAACCAT GGTACGTCGC ATTACGTAAC
GAATACCAAG ACCGTTACTT GTCTGCATAA
|
|---|
| Protein sequence | MTLSRRQFVK GASIAGAVAA TPFSINKAIA ANKELRIYAW AGYITDEMLA DFKAKTGINA
TFTPYGTNDE LMNSLRATDG TGFDIIMPTV DRVPGYVDYE LVQPLDVKRI KWSGCLESAL
SGSDVGGIVK GKRYFAPSDW GTEAIAYNKN DAKISKELSY GDLWLPENSG GVTVRGHSAL
VGIGLWLEKA GKLPYPLLDS YKTEKAMRAN FDVILKTAVE HKGAIAQFWS TENEAQGAFR
TNGAIIGQTW DSTAFKLQSE GEPIAYGAPK EGALAWMEGF VIPKNANNVD SVYEFINWYY
TPEAGAMFVK ATGYNSTAKG ADALLPAETK QFFQDSYSKQ DLANLWWWPI QEPWYVALRN
EYQDRYLSA
|
|---|
| |