Gene Mmwyl1_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_4299 
Symbol 
ID5366703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp4868030 
End bp4868539 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content42% 
IMG OID640806701 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001343129 
Protein GI152998294 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.031779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAG ATTTACAACT CCAATTCACT CAGCTTTATG AAATGCATCA AGGATGGCTA 
TCTAATTTTC TTCGCAAGCG ACTTAATTGC TCACACAAAG CCGCGGATTT AATGCAAGAC
ACCTACTTGA AAGTATTGGT TAGTGGGAAA ATACCGCCTA CCGAATACGC ACGCCAGTAT
TTAACCTGTA TCGCTAAGGG TCTAGTTGTT GATCAATATC GTCGGTGGCG TATTGAGCAG
GCATACTTGG AATCAATCAG CCACCTTCCT GAAGAGCATC ATTCATCACC AGAAAAACGC
CTTGAAGTTA TCGAGACCTT AATAGAGATA GATACGCTAT TACACCAAGT ATCGGAAAAA
GCACGACAAG CATTTCTACT GCGCAGACTA GAAGGGCTGT CCTATTCCGA CATTGCAGTG
CAATTAAACG TATCAATATC TTCTGTAGAG AAATACATCG CCAAAGCATT ACAAGCGTGT
GCCATAGCCA TGATGGAGAG ACACAAATAA
 
Protein sequence
MNRDLQLQFT QLYEMHQGWL SNFLRKRLNC SHKAADLMQD TYLKVLVSGK IPPTEYARQY 
LTCIAKGLVV DQYRRWRIEQ AYLESISHLP EEHHSSPEKR LEVIETLIEI DTLLHQVSEK
ARQAFLLRRL EGLSYSDIAV QLNVSISSVE KYIAKALQAC AIAMMERHK