| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4297 |
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| Symbol | |
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| ID | 5369093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4864294 |
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| End bp | 4866498 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640806699 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001343127 |
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| Protein GI | 152998292 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.92876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00384983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATATC CTTGGGGAAC AATATTAGGC TATTTTCTAG CTTTATGTTT TTTACTCATA
TTTATATATG TCTATATTAG AATTAAAGTA GAAAGAAACA TTTTATTTCA ACAGCTTGAA
CACGCTGAAA ACTATAAAAA CCAATTAACA TCATCGCTCG ACGCTCTTTC TGATCCTATG
TGGATTAAAG ACAAAGACCA AACCTATATT TATTGTAATC CTGCATTTGA GCAATTTATC
GGCCTATCAA AACTAGAGAT AATCGGTTAC AAAGATGAAG AAATTCAATC TCAACACGTC
CAGCTTAGTC AAAATATCAT CCCTGCCATT ACTTCAAATG AAGAAACAGG AGCAACCGAA
GAGTACGTTT GTTTACCCTG TGGCAACGTA GATTACTTTC AAGTCAGTAC CGAACGCATA
TACGACATTA GCGACCAACT CTTTTCGTCG GTTGGTTATG CGCAAAAAAT AACACCATTC
AAAGAAAGGG AAAGCGAACT TATCGATGCT GAAATACGCG TAAACGAAGC ATTAAAGTTA
ACAAAAGTCG GCATTTGGGA ATGGAATGTC GACAAAGACA TCTGGTTTGC AACTCCATCG
TATTTCACTA TGCTCGGCTA TGCTCCCGTC GAAGGTATGG CAGATAGAAA GGCTGAATTA
GAAAAAATAC ACCCTGAAGA TCGTCAGCAT GTTATGGACA GCGTAAATAA TATTCTGACC
AGCAAAAGTG AATCAAATTA TTACAAATAC CAAGCTCGAA TTAGGCATAT AGACGGCAAC
TATCGATGGA TAGGCGTACG TTGCATTGTG ACAGAATTTG ATCAAGAAGA TAAACCAGCT
CGCATGCTTG GCGTACGAAT TGATATTGAT GAAATTCAAA AGGCACATGA TCAAGTCGAG
TGGTTAGCAC ATCACGACTC ATTAACAAAA CTTCCAAACA GAGTTGCACT GAATAAGACA
TTCCATAAAA TCATCAAACC TAATACAAAA ATAGCATTAC TATTTATCGA CTTAGACCAC
TTCAAAAACG TCAACGACAC ACTTGGCCAT AGTATAGGAG ATCAGCTACT ACTTACTGTT
GCAGACAGAA TGCGTACCTT GGTTAATAAT ATTGGTTACG TTGCACGACA AGGCGGTGAC
GAATTTATTA TTCTGCTACC TGCAGATAAT GAAGAATGTT TAATCGAAAA AACCTGTGCT
ATCAAAGAAG CTTTATCCGC GCGCTATAAC ATCGATCAGC ATCAGTTTTT TATCACACCG
TCTATCGGCG TGAGCCTATA TCCGCGAAAT GGAGAAGACT TCGACACCCT GTATCAGCGA
GCAGATGCCG CTATGTATCA TGCCAAGCAT ACGGGCAGAA ATCGATACGC TTTTTTCACC
GAAGAAATGC AAGCTATTTC GACACGAGCA CTTACATTAG GTAATGCCCT TCATGACGCC
ATAGAACGAC AAGAGTTTTC TTTACACTAT CAGCCGCAAA TTTCGCTCAT CACAGGAAAA
ATAATCGGTG CGGAAGCACT CATTCGATGG CATAGCCTAG AATTAGGTCA TGTCAGCCCA
GGAGAATTCA TTCCCCTTGC AGAAGAGAAC GGACAAATTT TGGCCATAGG AGAATGGGTT
TTACGAGAAA CAGCGCGCCA ACTAAAACAA TGGCTAGAAG AAGGAATTAC TCCTGTTAGA
ATTGCAGTAA ACCTGTCATA TGCCCAGTTT CAAGTAAATG ACCTTCCTTC TATTGTGGAA
GCAATACTCA ACGAATACGC CGTACCTGCA CAATACTTAG AACTTGAGCT CACCGAGCGC
ATTGCAACGA AAGATCCTGA GCACACAATA ACAATACTAG AATCTTTTCA GCAACTTGGA
ATACACACAT CCATCGACGA CTTTGGTACA GGCTATTCAT CATTGAGCTA TCTCCAACGA
TTCCCCGTTT ATAAGCTCAA AATCGACCAG TCTTTTGTAC GTAACATGAC AACCAATACC
AACGATCAAG TCATAGTAGG CACTATTATC CTACTCGCAC AACAACTAGG CATGACTACA
ATAGCCGAAG GTGTGGAAAC GAAAGCGCAA CTAGAAATGC TCTACAATAT TGGTTGCGAT
GATATTCAGG GGTATTACAT CAGTCGGCCA ATTCCAGCAG AAGAGTTCAA AATAGGTTTC
TTGCAGAAAA AGCAAAGGTT TCTTGTCGCT CAAGACGAGC ATTAA
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| Protein sequence | MTYPWGTILG YFLALCFLLI FIYVYIRIKV ERNILFQQLE HAENYKNQLT SSLDALSDPM
WIKDKDQTYI YCNPAFEQFI GLSKLEIIGY KDEEIQSQHV QLSQNIIPAI TSNEETGATE
EYVCLPCGNV DYFQVSTERI YDISDQLFSS VGYAQKITPF KERESELIDA EIRVNEALKL
TKVGIWEWNV DKDIWFATPS YFTMLGYAPV EGMADRKAEL EKIHPEDRQH VMDSVNNILT
SKSESNYYKY QARIRHIDGN YRWIGVRCIV TEFDQEDKPA RMLGVRIDID EIQKAHDQVE
WLAHHDSLTK LPNRVALNKT FHKIIKPNTK IALLFIDLDH FKNVNDTLGH SIGDQLLLTV
ADRMRTLVNN IGYVARQGGD EFIILLPADN EECLIEKTCA IKEALSARYN IDQHQFFITP
SIGVSLYPRN GEDFDTLYQR ADAAMYHAKH TGRNRYAFFT EEMQAISTRA LTLGNALHDA
IERQEFSLHY QPQISLITGK IIGAEALIRW HSLELGHVSP GEFIPLAEEN GQILAIGEWV
LRETARQLKQ WLEEGITPVR IAVNLSYAQF QVNDLPSIVE AILNEYAVPA QYLELELTER
IATKDPEHTI TILESFQQLG IHTSIDDFGT GYSSLSYLQR FPVYKLKIDQ SFVRNMTTNT
NDQVIVGTII LLAQQLGMTT IAEGVETKAQ LEMLYNIGCD DIQGYYISRP IPAEEFKIGF
LQKKQRFLVA QDEH
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