Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4291 |
Symbol | |
ID | 5364845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4857003 |
End bp | 4857737 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640806693 |
Product | Baf family transcriptional activator |
Protein accession | YP_001343121 |
Protein GI | 152998286 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0765187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000299945 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCCGTCG AGTCTAGAGT TTTAGTTGTT GATGCGGGTA ATACTAGTAT CAAATTTACT GCCTTTGAAG GCGAGCAAGT ATTGTGGGTT CTGCGAGGGG ATAGTTGTCC TGCGGAAACT GATTTTGCTC CGCAGGTGAT TTATTTTGCC AGTGTACGAT CTAAAGAGCA AAGTGCATTG TTACATGCTG ATGTCCAAGC TGCGTTCCCT AGCAGTGAAT GGATTACGCT GACGAGTCAA GCGACCGCTT GTTGTGTTCG TAATGCCTAT ATTGAACCTG AGCGCTTGGG AATTGATCGA TGGCTTGGTG TTGTTGCGGC TCATCACCTG ATAAAAGGCA ATGTAGTCGT TGTGGATGCA GGTACGGCGA TAAAAGTAGA TGTGGTTAAT AGCGAAGGCG CTCATCTTGG TGGTTATATC GCTCCTGGCT TGGCGATGAT GACGGAATCT TTGCTCTCGA AAACTGCTCG GATTCGCTTT GATTCCCATG AAGTGGTCGA AGGTGAGGGG CTGCCTAACT CTACGGCAAG AGCGGTGACA GAAGGTTGTC ATGAGATGGC GTTGGGTTTT TTAGAGCGTA TTCATCATCT GTACCCTGAA TTTAAATGGG TTGTGACAGG TGGAGATGCG CAAGCGTTAT TGAATAGATT AGGCATTGCG CTCGAATGTT TTCCTAATCT TGTGGCTTTG GGTGCAAAGC TGGTTGGTGA TGAGCAGTTA AGAGGCAATA AATGA
|
Protein sequence | MSVESRVLVV DAGNTSIKFT AFEGEQVLWV LRGDSCPAET DFAPQVIYFA SVRSKEQSAL LHADVQAAFP SSEWITLTSQ ATACCVRNAY IEPERLGIDR WLGVVAAHHL IKGNVVVVDA GTAIKVDVVN SEGAHLGGYI APGLAMMTES LLSKTARIRF DSHEVVEGEG LPNSTARAVT EGCHEMALGF LERIHHLYPE FKWVVTGGDA QALLNRLGIA LECFPNLVAL GAKLVGDEQL RGNK
|
| |