| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4282 |
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| Symbol | |
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| ID | 5367925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4843915 |
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| End bp | 4848117 |
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| Gene Length | 4203 bp |
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| Protein Length | 1400 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640806680 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_001343112 |
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| Protein GI | 152998277 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0186165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000438603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAGACT TATTAGGTCT TCTAAAATCA CAGGGACAAT CTGACGAGTT TGATGCGATC
CGCATTGGCT TGGCATCACC AGATATGATT CGTTCATGGT CTTATGGTGA AGTTAAAAAG
CCAGAGACCA TCAACTACCG TACGTTCAAA CCAGAACGTG ACGGTTTGTT CTGTGCAAAA
ATCTTTGGTC CTATTAAGGA CTACGAATGC TTGTGTGGTA AATACAAGCG TTTGAAACAC
CGTGGTGTTA TCTGTGAGAA GTGTGGCGTT GAAGTGGCTC TGTCTAAAGT GCGTCGTGAA
CGCATGGGTC ACATTGAGCT TGCATCGCCT GTTGCACACA TTTGGTTTTT GAAATCTTTA
CCGTCTCGTA TCGGTCTTAT CTTAGATATG ACGTTGCGTG ACATTGAGCG TGTTTTGTAT
TTTGAATCTT TCATCGTGAT CGATCCAGGT ATGACGACGC TTGATAAAGG CCAATTGCTA
AACGATGAGC AGTATTTTGA AGCGCTAGAA GAATTCGGCG ACGAGTTTGA TGCCCGTATG
GGTGCGGAAG CGGTTCAGAT GTTGCTTCGC GATTTAGATA TGCCTGTAGA AATTAACAGC
ATGCGTGAAG AGCTAAACAG CACAAATTCT GAAACTCGCA TTAAGAAGCT TTCTAAGCGC
CTTAAGCTAG TTGAAGCATT CTATCATTCT GGCAACAACC CTGAGTGGAT GGTGCTAGAC
GTGTTGCCAG TTCTTCCGCC AGATCTTCGT CCATTGGTAC CACTTGAAGG TGGCCGTTTT
GCGACGTCTG ATTTGAACGA CCTTTATCGT CGTGTGATTA ACCGTAACAA CCGTCTAAAA
CGCCTGTTAG AGCTATCAGC TCCAGATATC ATCGTACGTA ACGAAAAGCG TATGTTGCAA
GAATCTGTTG ATGCTTTGCT TGATAACGGT CGTCGTGGTC GTGCAATTAC GGGTTCTAAC
AAACGTCCTC TAAAATCTTT GGCTGATATG ATCAAAGGTA AGCAAGGTCG TTTCCGTCAG
AACTTGCTAG GTAAGCGTGT TGACTATTCT GGTCGTTCTG TAATCACAGT AGGTCCATCA
CTGCGTCTAC ATCAGTGTGG TCTACCTAAG AAAATGGCAC TTGAGCTATT CAAGCCATTT
ATCTTCTCTA AGCTTGAGCT TCGTGGTATG GCTACGACGA TCAAAGCAGC GAAGAAAATG
GTTGAGCGTG AGACGCCTGA AGTATGGGAT ATCCTTGATG AGGTTATCCG CGAACATCCA
GTGATGTTGA ACCGTGCGCC AACACTTCAC CGTTTGGGTA TCCAAGCGTT TGAACCAATG
TTGATCGAAG GTAAAGCGAT TCAGTTGCAC CCACTAGTGT GTGCGGCATA TAACGCCGAC
TTCGATGGTG ACCAAATGGC GGTTCACGTT CCGTTGACTA TCGAAGCGCA GCTTGAAGCT
CGTGCCTTGA TGATGTCTAC GAACAACATC CTATCACCTG CAAACGGTGA ACCGATCATC
GTTCCTTCTC AGGACGTTGT ATTGGGTCTG TACTATATGA CTCGTGAGAA AATCAATGCT
AAAGGCGAAG GCATGGCATT TTCTGACATC AAAGAAGTAC ACCGTGCGTA TGGTGCTAAA
CAAGTTGAAT TGCACGCGAA AGTAAAAGTA CGTATCAGCC AAGTTGATAC CACGCTTGAT
GGCGACAAAG TGCCATCTAC TTTCATTGCA GATACAACCG TTGGTCGTGC CTTGTTGTTT
GATATTGTTC CTGATGGCCT ACCGTTCTCT GTGGTTAACC AAACCATGAA GAAGAAAGCG
ATCTCTAACT TGATCAACGA GTGTTACCGT AAAGTAGGCT TGAAAGAGAG CTGTATTTTT
GCTGACCAAT TGATGTACAC AGGTTTTGCT TACGCGACAG CGTCAGGTTC TTCTGTTGGT
GTTGATGACT TCGTTATTCC ACCAGAGAAA GCGGCGATCA TTGCTAAAGC AGAGGCAGAA
GTTAAAGAAA TCGAATACCA GTATGCGGAT GGTCTTGTAA CCCAAGGCGA GAAGTACAAC
AAGGTAATCG ATTTATGGTC TCGTACTAAC GAAACTGTAA CTGAAGCCAT GATGAAAAAC
TTGGCAAAAG AGATGACTGT CAATAAAGCA GGTGAAACGG TTGAGCAGCA ATCTTTCAAC
TCTGTATATA TGATGGCCGA TTCTGGTGCC CGTGGTAGTG TTGCGCAAAT GCGTCAGTTA
GGTGGTATGC GTGGTCTGAT GGCGAAACCA GATGGTTCCA TCATCGAAAC ACCAATCACT
GCGAACTTCC GTGAAGGTCT GTCAGTGCTT CAGTACTTTA CCTCTACACA CGGTGCTCGT
AAGGGTCTAG CTGATACGGC ATTGAAAACA GCAAACTCTG GTTACTTGAC TCGTCGTCTA
GTAGACGTAG CGCAGGATTT GGTTATCACT GAAGTAGATT GTGGTTCTAC AAACGGTATT
TCCGTTGCAG CCATGATTGA AGGTGGTGAC GTAGTTGTTC CGCTAGGTCA TCGCGTATTG
GGTCGTGTAG TAGCTCAAGA TGTTATTGAT GGTAAAGGTG ATTTTGTTCT TGCTGCAGGT
ACTTTGATTG ACGAACATGA TGTTCGTACT ATCGAAGCGG CTGGTGTGGA TGAAATGATC
ATTCGTTCTG TTATCACTTG TAATACACGT CATGGTGTAT GTGCTAAGTG TTACGGCCGT
GATCTTGCTC GTGGTCATCA AGTTAACATT GGTGAAGCGA TTGGTGTTGT TGCAGCACAG
TCTATCGGTG AGCCAGGTAC ACAGTTAACA ATGCGTACGT TCCACATCGG TGGTGCGGCA
TCTCGAGCGT CTGCGATTGA TAGCGTTCAG GTGAAGAGTG CGGGTACGGT ACGTTTCAAT
AAAATGAAGA GTATCGAGCG TCACACTGGT CACCTAGTTG TTGCATCTCG TTCTTCTGAA
TTGGCCATTG CTGACGAAGC GGGCCGTGAG AAAGAGCGTT ACAAGCTTCC TTACGGTGCG
GTATTGAGTG TGCGTGAAGG TGATCAGGTT ACTGCGGGTC AAATCGTAGC TAACTGGGAC
CCACATACTC ACCCAATCGT ATCTGAGATG GAAGGTCGTC TTGAGTTCAG TGGTATGGAA
GAGAACGTTA CTATTCGTCG TCAATCTGAC GAAATGACGG GCTTGACTAC TATTGAAGTT
ATGGAGATGC GTGATCGTCC TGCAGCTGGT AAAGACATAC GTCCGATGAT TGCCGTTGTT
GATGCAGAGG GTAACCCTGT ATTGATTCCT GGTACTGAGT CACCAGTGCA GTACATGCTT
CCTGAAAAAG CATTGTTGAG CCTTGATCAT GGCGCGACAG TGAAATCAGG TGAGGTTCTT
GCGCGTATCC CACAAGAATC TATTGGTAAC AAAGATATCA CCGGTGGTTT GCCACGAGTG
GCAGACCTAT TTGAAGCGCG CCGTCCGAAA GATCCTGCTG TTATGGCGGA AACTAGCGGT
GTGGTTAGCT TCGGTAAAGA AACAAAAGGT AAGATTCGTT TGGTTATCAC CCCTCAAAAC
GGTGATGAGC CAGTTGAGAC TTTGATTCCT AAATGGCGTC AAATCAACAT CTTTGATGGT
GAGGAAGTGG CTAAAGGTGA GATTATTGCC GACGGTCCTT TGAGCCCTCA TGACATTTTG
CGTCTTCAAG GTGTAGAGGC TTTGGCTGAT TACATCACGA ATGAAGTGCA AGAAGTTTAC
CGCTTACAAG GCGTAGTAAT TAACGATAAG CATATTGAAG TTATTGTTAA CCAAATGTTG
CGTAAAGTAG AAGTTGGTGA GTCTGGTGAT ACAGATCTTA TTCAAGGTGA TCAGGTTGAG
TATACTCATC TGTTGGATGC AAACGAAAAA GCCGAAGCAG AGGGTAAGTT CCCTGCTAAG
TTTGAGCGTG TGCTTCTAGG TATCACTAAA GCTTCTTTGG CTACTGAGTC CTTTATATCA
GCAGCATCTT TCCAAGAGAC AACTCGAGTT CTTACGGAAG GTGCGGTAAC TGGTAAGAAA
GATCACTTGC GTGGCTTGAA AGAAAACGTT GTTGTGGGTC GCTTGATACC AGCCGGTACA
GGTTTGGCTT ACCACAATGA GCGCAAGAGA AAGAAAGAGC TTGCGCTAGC AGCGAAGGAA
GGAAGTTCGA CAGTAAGTGC CTCAGATGTT GAAGAAGCAT TGAGTGCTGC ACTGAAAGAC
TAG
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| Protein sequence | MKDLLGLLKS QGQSDEFDAI RIGLASPDMI RSWSYGEVKK PETINYRTFK PERDGLFCAK
IFGPIKDYEC LCGKYKRLKH RGVICEKCGV EVALSKVRRE RMGHIELASP VAHIWFLKSL
PSRIGLILDM TLRDIERVLY FESFIVIDPG MTTLDKGQLL NDEQYFEALE EFGDEFDARM
GAEAVQMLLR DLDMPVEINS MREELNSTNS ETRIKKLSKR LKLVEAFYHS GNNPEWMVLD
VLPVLPPDLR PLVPLEGGRF ATSDLNDLYR RVINRNNRLK RLLELSAPDI IVRNEKRMLQ
ESVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPS
LRLHQCGLPK KMALELFKPF IFSKLELRGM ATTIKAAKKM VERETPEVWD ILDEVIREHP
VMLNRAPTLH RLGIQAFEPM LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTIEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTREKINA KGEGMAFSDI KEVHRAYGAK
QVELHAKVKV RISQVDTTLD GDKVPSTFIA DTTVGRALLF DIVPDGLPFS VVNQTMKKKA
ISNLINECYR KVGLKESCIF ADQLMYTGFA YATASGSSVG VDDFVIPPEK AAIIAKAEAE
VKEIEYQYAD GLVTQGEKYN KVIDLWSRTN ETVTEAMMKN LAKEMTVNKA GETVEQQSFN
SVYMMADSGA RGSVAQMRQL GGMRGLMAKP DGSIIETPIT ANFREGLSVL QYFTSTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVIT EVDCGSTNGI SVAAMIEGGD VVVPLGHRVL
GRVVAQDVID GKGDFVLAAG TLIDEHDVRT IEAAGVDEMI IRSVITCNTR HGVCAKCYGR
DLARGHQVNI GEAIGVVAAQ SIGEPGTQLT MRTFHIGGAA SRASAIDSVQ VKSAGTVRFN
KMKSIERHTG HLVVASRSSE LAIADEAGRE KERYKLPYGA VLSVREGDQV TAGQIVANWD
PHTHPIVSEM EGRLEFSGME ENVTIRRQSD EMTGLTTIEV MEMRDRPAAG KDIRPMIAVV
DAEGNPVLIP GTESPVQYML PEKALLSLDH GATVKSGEVL ARIPQESIGN KDITGGLPRV
ADLFEARRPK DPAVMAETSG VVSFGKETKG KIRLVITPQN GDEPVETLIP KWRQINIFDG
EEVAKGEIIA DGPLSPHDIL RLQGVEALAD YITNEVQEVY RLQGVVINDK HIEVIVNQML
RKVEVGESGD TDLIQGDQVE YTHLLDANEK AEAEGKFPAK FERVLLGITK ASLATESFIS
AASFQETTRV LTEGAVTGKK DHLRGLKENV VVGRLIPAGT GLAYHNERKR KKELALAAKE
GSSTVSASDV EEALSAALKD
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