| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4159 |
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| Symbol | |
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| ID | 5366476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4716417 |
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| End bp | 4718366 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640806555 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001342990 |
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| Protein GI | 152998155 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.876202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACT CAGGTTCCAG CAATGGCTTT CAAAGCTTGC TCCTTGAATC AAAATTCGCT
GGTGGCAAGG AACGTCTAGC AGTCTCTTTA TTGTTTAGTG TGATCGCCGC TGGAATCGCC
GGTCTTGTAC TTTACGGTGC GTATTATGGT GGCATTACCG CGTTGCTATT GAGATCGTCG
TTTTTCTCTT TAGTCGCAGC GGCTGCCATG CTGTTTTATG CGCTGAGATA CAAAAGTGTC
GTGGGTCGTG GAGCGTTTTA TCTATTGGCT TTATTAGCGT TAATTCCAGG ACCTTATTTG
TGGCATTACT ACATTGACAT TGTTATGCGT GGTGCTATGT CGGTTGAGCA AGATAGGTTG
ATCTTTATTG CTCTCATTGT GGTGGTGTTT GTTTTTGTTC GTATCGCGGT AGGCTGGGCA
TTGATTACCT TAATGGCCCT CGCTTTCCTT TACGCGTACT TTGGCTATTT GATCCCCGGT
AAATATGGTC ATGGCGGTTA TGACATAAGC CGTTTTACCT CAACCCTGAT GTTATCAACT
GAAGGAGTTT ATGGTGTGCC CATGGGCGTC GCCGTTGAAT ATATTTTCCT ATTTGGTTTG
TTTGGCGCCA TCTTAACTAA GATTGGGACA GGCGAAGTGT TTGTTGATTT GGCCCGTGGT
TTGACGGGGC GCGTGCAAGG TGGTCCTGGA TTGTCTGCCG CTTTGTCTAG TGCATTGCTT
GGTTCGCTTA ACGGCAGTGC TGTCGCAAAC GTGGTGACCA CAGGTACCTT TACCATTCCA
TTAATGAAGC GTGTTGGTTA TAGCGCAAAA TTGGCTGGTG CGATTGAAGC CGCCGCGTCT
TCCGCTGGAC AAATTATGCC GCCGGTTATG GGGGCAGCTG CTTTCTTGAT GGCGGAAATG
ATTGGGATTC CTTATGCTGA AGTGGCAATG GCGGCCTTGG TTCCAGCGCT TTTGTATATT
TTAGCCTTGA TGATTTCAGT TCGCCTTGAG GCAGGACGTC TTAACTTAGC AAGGGACACA
GAAGCTGGCT TACAGTTGTT ACTAAGAACT CTTAAAACGA AGAGCTATCT TCTGCTTCCA
TTGGTGGTTT TGATCGGTTT GATGATTTCA GGCAAGTCAC CAACTCAAGC TGCTGTTATG
GGGATTCTAG CTGGTTTGTT AGTTTGTCCT TGGAAAAAAG CCACTCGTAT AAATCTGCTA
GATATTATAG CTGCTTGTAA AGAGACATTG TCTTCAACCT TACCAATCGT TGCAGCTGTG
GCGGCGGCAG GCGTGATTAT CGGGATATTG AATTTAACTG GTATGGGCTT GATGTTGTCT
GGTTTGATCA TTGAACTGGG CGACGGTAAT TTGTGGGCTG TCTTGCTGCT CACTGCGTTG
GCGTCTTTTG TCTTAGGTAT GGGGTTACCG ACATCTGCGG CGTATTTATT GCTCGCGGTA
TTGGTTGCTC CGGCGATGAC ACAGTTAGGT ATGGAAACCT TGTCGGCGCA TATGTTTATT
TTTTACTTTG GTTTGGTATC AGCTATTACT CCTCCTGTCG CATTGGCTGC TTACGCTGCT
TCTACTATTT CCGGAGCAGA TCCTAATGAG ACGGCGATTG AGTCTATGCG TTTGGGTTTT
GTAAAACTCT TAGTGCCCTT CTTGTTCGTC ACTATGCCTG GGGTTTTGTT GATCGGAACA
ACTGCTAGTG TCATCGCAGC GATCTCGTTT GCGACCTTGG CAACTGCATC AATGAGCATA
GGCTTTTCTG GTTGGTTACG TGAGAATTTA TCTTGGCCTA CTCGTTTGGC TTATGTGGTC
GCAGCGGTAT TAATTGCTTG GCCTGCAGCG GCTACGGACA CGTCTATTGC TGTGTTGGGC
GCTCGTGTTA TCGGTATTGT GCTGTTTGCT GGATTGCTGT TCAGGGCAGG TATTCAATCA
ACCCCCAATA GCATGAAGGC TGAAACATAA
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| Protein sequence | MLNSGSSNGF QSLLLESKFA GGKERLAVSL LFSVIAAGIA GLVLYGAYYG GITALLLRSS
FFSLVAAAAM LFYALRYKSV VGRGAFYLLA LLALIPGPYL WHYYIDIVMR GAMSVEQDRL
IFIALIVVVF VFVRIAVGWA LITLMALAFL YAYFGYLIPG KYGHGGYDIS RFTSTLMLST
EGVYGVPMGV AVEYIFLFGL FGAILTKIGT GEVFVDLARG LTGRVQGGPG LSAALSSALL
GSLNGSAVAN VVTTGTFTIP LMKRVGYSAK LAGAIEAAAS SAGQIMPPVM GAAAFLMAEM
IGIPYAEVAM AALVPALLYI LALMISVRLE AGRLNLARDT EAGLQLLLRT LKTKSYLLLP
LVVLIGLMIS GKSPTQAAVM GILAGLLVCP WKKATRINLL DIIAACKETL SSTLPIVAAV
AAAGVIIGIL NLTGMGLMLS GLIIELGDGN LWAVLLLTAL ASFVLGMGLP TSAAYLLLAV
LVAPAMTQLG METLSAHMFI FYFGLVSAIT PPVALAAYAA STISGADPNE TAIESMRLGF
VKLLVPFLFV TMPGVLLIGT TASVIAAISF ATLATASMSI GFSGWLRENL SWPTRLAYVV
AAVLIAWPAA ATDTSIAVLG ARVIGIVLFA GLLFRAGIQS TPNSMKAET
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