| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4109 |
|---|
| Symbol | |
|---|
| ID | 5366738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4644271 |
|---|
| End bp | 4645809 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640806502 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001342940 |
|---|
| Protein GI | 152998105 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000000359898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA TTATTTTGGA AATGCGCAGC ATTACCAAGA CATTTCCTGG AGTAAAAGCC
CTCGACGCGG TGAACCTTAA AGTTCGTGCT GGCGAGATTC ACGCTTTAGT GGGTGAAAAT
GGTGCGGGTA AGTCGACTCT CATGAAGGTG TTGAGTGGGG TTTATCCATA CGGAAGTTAC
GAAGGCGATA TTCTTTTTAA TGACGAGACC GTGGCGTTTT CCGGTATTAC GGACAGCGAA
GAAAAAGGCA TCATTATTAT TCACCAAGAG TTGGCGCTAG TGCCGCTTTT ATCAATCGCA
GAGAATCTAT TTTTAGGTAA CGAGAATGTA GAAGGTGGCG TGATTAATTG GCCAAAAACC
TATTCTCGTA CGCAAGAATT GTTAGCCAAA GTCGGCTTGA AAGAGTCTCC TTCGACCTTA
GTGGGTCAAT TGGGAGTGGG TAAGCAGCAA CTTGTTGAGA TTGCCAAAGC CCTTGCCAAA
GATGTGAAGT TATTGATTCT GGATGAGCCA ACGGCTGCGC TACAAGAGAA CGACAGCGAG
AAGTTACTTG ACCTATTGTT GGAATTTAAA GCTCAGGGTA TTTCCTCCAT CCTAATTACC
CACAAATTAA ACGAAATCAG CCGTGTAGCA GACAGCATCA CAGTGATTCG TGATGGCGCT
TCTGTATCTA CTCTAGATTG TCATGCGCAG AGCATCAGTG AAGCAGACAT TATTCGCGAT
ATGGTTGGCC GAGATATGGC GAACCGTTAC CCAGCAAGGA AGCACCCGAC CCAAGAAGGT
CATTTAGGCA AAACGCTCAT GGAAGTAAGC CGTTGGAATG TGTGGCATCC CGATGCGTTA
GATCGTCAGA TGATTCATGA TATTGAATTC AACGTGCACG CCGGTGAAAT TGTCGGGATT
GCGGGTTTGA TGGGCTCAGG ACGAACTGAA TTGGCAATGA GTTTGTTTGG TCAGAGTTAT
GGCAAAAACA TCCAAGGCGA AGTGCGTTTA CGCGGTGAAA TCGCCGATTT ATCAACCGTG
CCAAAGGCCA TAAAAAGTGG TTTGGCGTAC GTCACCGAAG ACCGTAAAGA ATTGGGTTTG
ATTTTAGAAG AAACCATCCA GACCAACACC ACTTTAGCGA ACCTTGATCG TGTGTCTTCA
AATGGTGTAA TTGACGGAAA CATTGAACGT CAGGTGTCAG AGGATTATCG ACAAGCGCTC
AATATTCGCA CGCCTAGCGT CTTTCAAAAG GTGATGAACC TATCAGGCGG TAACCAACAA
AAAGTGGTGT TGAGTAAGTG GTTGTATTCG CAGCCAGACG TTTTGATTCT AGACGAGCCA
ACCCGCGGCA TAGATGTGGG GGCTAAGTTC GAAATTTACA GCATCATCAA TGAGCTGGCC
GATGACGGTA AAGGCGTGGT GATGATTTCT TCAGAGATGC CAGAGTTGCT TGGCATGTGT
GATCGTATTT ACGTGATGAA CGAAGGCCGC TTTGTTGGTG AGTTAGACAA AGCTGATGCG
AGCCAAGAGA AAATCATGTC AATGATAGTG AAAGCGTAA
|
|---|
| Protein sequence | MENIILEMRS ITKTFPGVKA LDAVNLKVRA GEIHALVGEN GAGKSTLMKV LSGVYPYGSY
EGDILFNDET VAFSGITDSE EKGIIIIHQE LALVPLLSIA ENLFLGNENV EGGVINWPKT
YSRTQELLAK VGLKESPSTL VGQLGVGKQQ LVEIAKALAK DVKLLILDEP TAALQENDSE
KLLDLLLEFK AQGISSILIT HKLNEISRVA DSITVIRDGA SVSTLDCHAQ SISEADIIRD
MVGRDMANRY PARKHPTQEG HLGKTLMEVS RWNVWHPDAL DRQMIHDIEF NVHAGEIVGI
AGLMGSGRTE LAMSLFGQSY GKNIQGEVRL RGEIADLSTV PKAIKSGLAY VTEDRKELGL
ILEETIQTNT TLANLDRVSS NGVIDGNIER QVSEDYRQAL NIRTPSVFQK VMNLSGGNQQ
KVVLSKWLYS QPDVLILDEP TRGIDVGAKF EIYSIINELA DDGKGVVMIS SEMPELLGMC
DRIYVMNEGR FVGELDKADA SQEKIMSMIV KA
|
|---|
| |