| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4100 |
|---|
| Symbol | |
|---|
| ID | 5366661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4632435 |
|---|
| End bp | 4633679 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640806493 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_001342931 |
|---|
| Protein GI | 152998096 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00256573 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTT CTCATTCACC ACAACCCATT GGATCAACAG TAAAGCGCTT GGCTGAAAAA
GAGTTGGTGG CGTTGTTTGC TTTGATGATG TCGCTTACGG CGTTAAGTAT GGATGCCATG
TTGCCGGCGT TTCCTAATAT TGCTGAGTCT TTGGCGATTG TGGACTACCA GAAAACCCAG
TGGATTGTCT CAGCGATGAT TTTGGGGATG GTATTTGGCG AGATAGTATT TGGTCCTTTG
TCAGATGCGA TTGGGCGCAA GAAAAGTATT TTGCTAGGCA TTAGTGTTTA TTTGGTTGGG
TCTGTAATTG CTTTGCTAGC GTCTTCGATT GAAGCGTTTT TAATCGGACG AATGATTCAA
GGCTTTGGTG TCGCAGGCCC TAAGATTGCC TCGCGGGCCT TGATTCGAGA TATGTACAAA
GGCGCGGCCA TGGCTCGTAT TATGTCCTTT GTGATGATGA TTTTTCTTCT TGTGCCTATG
TTAGCGCCTT CAGTAGGGCA GTTGGTGGTT AAGGTGGCTG ATTGGCGCTG GATTTTTGTG
TTGTTAATGA CGCAGTCTGC CGTCGCCGGT ATTTGGTTGT TATTACGTCA GCCAGAAACA
TTAGCCATAG AAAACCGTAT TCCACTGCGT TGGGAGCGTA TTTGGTTAGA CATTCGGTTT
GTCTTAAGCC GTCGTGATGT GGTGGCTTAC ACCATTTTAT TAGGCTGTGT GTTTGGTGCG
GTTATGCTTT ATATCAGCAC CGCCCAGTCG ATCTTTCAGG ATGTGTATGA GACGGGTGAT
CGTTTCCCAT TGTTCTTCGC TATTTTAGCG ATCGGTTCCG CTATTATTAA CTTCTCTAAT
GGCAAGATCG TGATGCATGT CGGCATGTTG CGCTGTGTGG TTGGTGCATT AAGTGTGATG
TTAACCATGG CGCTGATTTT GTTAGGGTTG TCTTTAAGTT TTGATGGCGT GCCGCCCTTT
GGTTTATTCA TGGTGTTGGG TGTGGTGATG TTTTCTTGCC TTGGGATGAT TTTTGGCAAT
GTGAATGCGA TGGCGATGGA GCCATTGGGT AAAGTGGCTG GGCTTGGAAC CTCTCTGATT
TCGTCTCTTT CTAGTTTGAT TGCCATTATT TTGGCCGCGA TCTTGGGGCT GTTTTACAAC
TTTACCCTTG TTCCTTTGGC GGCTGGTTTT GTGTTGTTTT CGGCCGTCGC CTTGATCATG
CTGAGATACG GTTACCTCGC CAGCAAAACC TATCCAGAAG AATAA
|
|---|
| Protein sequence | MSLSHSPQPI GSTVKRLAEK ELVALFALMM SLTALSMDAM LPAFPNIAES LAIVDYQKTQ
WIVSAMILGM VFGEIVFGPL SDAIGRKKSI LLGISVYLVG SVIALLASSI EAFLIGRMIQ
GFGVAGPKIA SRALIRDMYK GAAMARIMSF VMMIFLLVPM LAPSVGQLVV KVADWRWIFV
LLMTQSAVAG IWLLLRQPET LAIENRIPLR WERIWLDIRF VLSRRDVVAY TILLGCVFGA
VMLYISTAQS IFQDVYETGD RFPLFFAILA IGSAIINFSN GKIVMHVGML RCVVGALSVM
LTMALILLGL SLSFDGVPPF GLFMVLGVVM FSCLGMIFGN VNAMAMEPLG KVAGLGTSLI
SSLSSLIAII LAAILGLFYN FTLVPLAAGF VLFSAVALIM LRYGYLASKT YPEE
|
|---|
| |