| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3988 |
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| Symbol | |
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| ID | 5368885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4493327 |
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| End bp | 4496383 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640806376 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001342819 |
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| Protein GI | 152997984 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0004] Ammonia permease
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT ACTATTGGTT GTTGGTGGCC TCTGCGCTTG TATTTATGAT GCAGGCTGGT
TTTTTGTGTT TAGAAAGTGG TCGTATTCGC AGTAAAAACA GCATTAACGT CGCGGCGAAA
AATATATCTG ATTTTATAAT ATCGACGACA TTATTTTGGT TGTTTGGCTT TGGCATCATG
TTTGGTGACT CTGTGGCAGG GTTGTTTGGT GCAAGCGATT TCTTTTTTGA TGATCGGCAC
ACGCCTTGGG AAATAAGCTT TTTTCTTTTT CAAATGATGT TTTGTGGTAC CGCAGCAACG
TTAACGTCTG GAGCGGTTGC TGAGCGCATG ACATTCATTG GCTATCTGGC AATCACTGTT
GTTTTAAGTG CATTCATTTA TCCTATCGTT GGGCATTGGG CTTGGTCTGG TGTGTATCCT
TCAGAAGGAC CAGAAGGTTG GCTTGAGGCT CTTGGTTTTA TTGATTTTGC GGGTTCTACC
GTGGTGCACT CAGTTGGTGG CTGGGTAGCA TTAGCCGCGA TTATCATTAT TGGACCTCGC
CTTGGACGCT TTGAAGAGGG GATACGGTTA CCACCTGGTA ATAATCTTCC CTTGTCTGCT
TTAGGAACGC TATTAATTTG GTTTGGTTGG ATTGGTTTTA ATGGCGGTAG CACATTAGCG
CTAACCGATG ACGTACCAAT GATCATTCTA AATACCTTTA TATCTGCGGC TTGGGGCGCG
CTAATCGCTG CTGGAATTAA TTACTTTCGT GATGGCTATA TTGAGGTGGG CTTTGTGCTG
AATGGCACTA TTGCTGGCTT AGTTGGCATT ACTGCCTCTT GTCATGTGGT TTCACCTGGG
GCATCCGTTA TTATTGGCTC TGTTTCTGGC GTAGTTGTGT ATTTCGGTAG TTTACTGATG
GAGCGCTGGC GTTTAGATGA TGCATTAGAT GTTGTTCCAG CGCATTTATT TGCGGGTATA
TGGGGGACTT TGAGCGTCGC TTTATTTGGA CAGACAGATA AAATTGATAA TGGTTTGGGG
TTTTTAGGGC AGCTTGGGGT ACAAGCATTA GGTATTGTTG TTATTGGATT CTATTGCTTT
GTGGTGGGTT ATAGCTGCAT GTGGCTGCTG AATCGTTTTA TGCCGCTACG AGCGAGTAAA
GAGCAAGAAG AGCAAGGTTT AAATGTTGCA GAACATAGAG CTACAACCGA ATTATTTGAT
TTATTAACCT CCATGCAATA TCAACAAAAC AATGCGGATT TTTCAAAACC CGTACCGGAG
GAGCCTTTTA CTGAAGTTGG ACAGATTGCT CGGAAATATA ATCAAGTTAT TGATCGAGTG
AGTACTGAAA TTGCGCAGCG AGATGACGCT TTGATGCGTT TTCAAGAGAG TGAAATGCGT
AAGTCTGCGA TATTGAATTC ATCAATGGAT TGTATTGTCA CGATTAATCG CTTTGGTTCT
GTAATAGAGT TTAATCCAGC GGCGGAACGA ACATTCGGCT GCCTAAAAAA ACAAGTCGAA
GGTAAGAGTT TTATCGGTCT TTTTATTCGC GAAGAAGACA GAAAGAAAAT TTTCGAAAGC
TTGAACTCAG GTTTTTCTAC ATCAAACGGA TTGATATTGA ATCGACGTAA TCCGTTTCGC
TTACAGCGTA GTCCTAATAA TGATTTTCCT GCTGAAATTG CGATTACTAA GGCCAATGCT
GACTCTTCAC AAGAAAGTGA ATATACACTT CATATTAGGG ATATGACTCG CCACGTGAAA
CTACAGGAAC GCCTGAAGTT CCTAGCCTAT AGTGATCCAT TAACCAGTTT GTATAATCGT
ACTTATTTGA TGGACTCTTT AATCAGCGCT TTGCTTTTTG CTACCAAGCA AAAGACGTCT
GTTGGATTGC TGTTTTTGGA TCTGGATAAT TTCAAAATCA TCAACGACAC ATTAGGTCAT
AAAGCAGGTG ACGAATTACT GTGTGAAGTG GCTAGACGTT TAATTGCAGT GTCTGATCAG
TTTGATGTCA TCGCCCGTTG GGGCGGCGAC GAATTTGTCT TTATGATGAC GAAAGATGTC
AATGAAAGTC GTTTGGCTAA GCGAGCGCAA CAAATTTTAG AGGCCATGCG AGCGCCAGTG
AATTTAAACG AGCAATATTT CACTATACCA ACGAGCATTG GTATCGCCTA CACCGGCGAG
CAAAGTTTGG ATGCCGATAG GCTGATTCAA CAAGCTGATA TCGCAATGTA TTGGGCTAAG
GAAAAAGGTC GTGATAATGC GCAATTCTTT ACACCTGAAA TGTCCAATAT TGTCACGAAA
AAATTTGGAT TTGAGAAAGA GATTAATGAT GCGCTTGCAT CAGAACAGTT TTCTTTAGTT
TTTCAACCAA AAGTCTTTAT GGAAAAAGAA AACATCCTCG GTTTAGAGGC GTTGATCCGC
TGGAATCATC CAACCAAGGG GCTTATTCCA CCTGCTGACT TTATTCCAAT GGCGGAAGAG
TCTAACTTAA TCTCTAGAAT TGATGAGTGG GTGATTGATC AAGCTTTATT ACAGCAAAAA
GCATGGCGTG ATCAAGGTTT ACGGATTGTT CCTATTGCTG TGAATCTTTC TGGGCGGCAT
TTGGTATCGG ACTCTCTGGT GTCTTATATC TCACAGAAAT TAAATGCTTA CGGTATCGAG
GGATGCTTGC TAGAGATTGA AATTACTGAG GGGGTGCTAC TCCAAGATAT TCAGCGCTGT
ATCGAGGTGA TGGCAGAATT GAAAGAGTTA GATATTAGAA TCTCAGTAGA TGATTTTGGA
ACAGGCTATT CGTCGCTAAG CTATTTAAAA CGGTTACCGT TGGATATTTT GAAAATTGAT
CAGTCATTTG TTGAAGAATG CGATCGCCAT ATTGAAGACG CTAAAATATG TGAAACCATT
GTTCACTTGG CGCGAAATTT AGAATTGGTG ATTGTTGCGG AGGGGGTAGA AACCGCTCCG
CAAGCAGATA CGTTGAAGTC GTTAGGCTGT GAGATCTTCC AAGGCTACTA TTTCCATAAA
CCTATGGTAA GTGCTGATAT TGCCAAGTTG CTTATTGAGG ATCTTGTGAT TGGTTAG
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| Protein sequence | MAEYYWLLVA SALVFMMQAG FLCLESGRIR SKNSINVAAK NISDFIISTT LFWLFGFGIM
FGDSVAGLFG ASDFFFDDRH TPWEISFFLF QMMFCGTAAT LTSGAVAERM TFIGYLAITV
VLSAFIYPIV GHWAWSGVYP SEGPEGWLEA LGFIDFAGST VVHSVGGWVA LAAIIIIGPR
LGRFEEGIRL PPGNNLPLSA LGTLLIWFGW IGFNGGSTLA LTDDVPMIIL NTFISAAWGA
LIAAGINYFR DGYIEVGFVL NGTIAGLVGI TASCHVVSPG ASVIIGSVSG VVVYFGSLLM
ERWRLDDALD VVPAHLFAGI WGTLSVALFG QTDKIDNGLG FLGQLGVQAL GIVVIGFYCF
VVGYSCMWLL NRFMPLRASK EQEEQGLNVA EHRATTELFD LLTSMQYQQN NADFSKPVPE
EPFTEVGQIA RKYNQVIDRV STEIAQRDDA LMRFQESEMR KSAILNSSMD CIVTINRFGS
VIEFNPAAER TFGCLKKQVE GKSFIGLFIR EEDRKKIFES LNSGFSTSNG LILNRRNPFR
LQRSPNNDFP AEIAITKANA DSSQESEYTL HIRDMTRHVK LQERLKFLAY SDPLTSLYNR
TYLMDSLISA LLFATKQKTS VGLLFLDLDN FKIINDTLGH KAGDELLCEV ARRLIAVSDQ
FDVIARWGGD EFVFMMTKDV NESRLAKRAQ QILEAMRAPV NLNEQYFTIP TSIGIAYTGE
QSLDADRLIQ QADIAMYWAK EKGRDNAQFF TPEMSNIVTK KFGFEKEIND ALASEQFSLV
FQPKVFMEKE NILGLEALIR WNHPTKGLIP PADFIPMAEE SNLISRIDEW VIDQALLQQK
AWRDQGLRIV PIAVNLSGRH LVSDSLVSYI SQKLNAYGIE GCLLEIEITE GVLLQDIQRC
IEVMAELKEL DIRISVDDFG TGYSSLSYLK RLPLDILKID QSFVEECDRH IEDAKICETI
VHLARNLELV IVAEGVETAP QADTLKSLGC EIFQGYYFHK PMVSADIAKL LIEDLVIG
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