| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3962 |
|---|
| Symbol | |
|---|
| ID | 5366847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4468840 |
|---|
| End bp | 4470111 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806350 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001342794 |
|---|
| Protein GI | 152997959 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.835969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA ATGATCTATT AAATATACGT TACGCTACTG TTCAAGAAGC ACGCACAGAA
ATGTCAAAAT TGCTTCAGGC TCGCCCTGCA AATTACTCGT TGGACGCCCC GTTATACAAC
GATCCACACA TGTTCCGCGT CGATGTGGAG GAAATTTTCC AGAAGGAATG GTTATTTGTT
GGTATGACCA GCGAAGTGCC AAACCGTGGC GATTATTTCA CTGTTGAAAT CGCACAAAAC
CCAGTTCTGA TCGTTCGCGA TGCAGATGGC TCAGTAAATG CTTTTCATAA CACTTGTCGT
CACCGAGGCT CGCGCGTCTG CTTAGAACAT CGCGGCAAAG TAGCAAACTT GGTTTGCCCT
TACCATCAGT GGACCTACGA CCTTAAAGGG AACCTACTGT TTGCAGGAAC CGAGATGGGC
GACAGCTTTG ATAAATCCCA GCACGGCCTG AAGAAAGCTC ACTGCAAAAC AGCAGGAGGT
TTCATCTTTA TTTCTCTAGG CAAAGAAGAG CCTCAAGGAG ATTTTGATGA GTTCCTAGCA
ACACTCGAAG AATACATGGC TCCCTACGAC GTAGAAAATA CAAAATTGGT CGCTGAGTCT
AACATGTACG AAAAAGCTAA TTGGAAACTC GTACTTGAAA ACAATCGTGA ATGCTACCAC
TGTGTCGGCA GCCACCCTGA GCTGCTAAAT ACTATTCTAG AATGGGATGA CACAAACGAC
CCACGAGCAC CACAAGACTT CCTAGACCAC TACGCTGATC AAGCCGCCAA ATGGGATGAA
GAAGGCATTC CACACGAACA CCGCAGTTTC GGCCCAGGTA AACGCAACCG TATTGTTCGA
ATGCCACTAA AGAAAGGCAC GAAGGTAATG ACAATCGACG GCGAAGCGGG CTGCAAAAAA
TTACTCGGTA ATATCAAAAA TCCTGAGCTG GGCTCTATGC GAATTCTGCA CTTACCCAAC
TCTTGGAATC ACATGCAATC TGATCATTTC ATTGTATTCC GTGTATTACC AATCTCTGCT
CAAGAGTCTA TAGTTACCAC CAAATGGTTC GTACACAAAG ACGCAGTGGA AGGTGAAGAC
TATGATCCAA ATCGCCTACG CTATGTATGG GATGCCACCA ATGATCAAGA CAGAATTCTT
GGTGAAGAAA ACCAACGAGG GATTAACTCT ATAGGCTATC AAGCAGGACC ATATTCTGAA
ACTTTCGAGT TTGGCGTAAT GAATTTCCAA GAGTGGTATA CAGATACCAT CCAGAAAAAC
CTGAATAAAT AA
|
|---|
| Protein sequence | MNQNDLLNIR YATVQEARTE MSKLLQARPA NYSLDAPLYN DPHMFRVDVE EIFQKEWLFV
GMTSEVPNRG DYFTVEIAQN PVLIVRDADG SVNAFHNTCR HRGSRVCLEH RGKVANLVCP
YHQWTYDLKG NLLFAGTEMG DSFDKSQHGL KKAHCKTAGG FIFISLGKEE PQGDFDEFLA
TLEEYMAPYD VENTKLVAES NMYEKANWKL VLENNRECYH CVGSHPELLN TILEWDDTND
PRAPQDFLDH YADQAAKWDE EGIPHEHRSF GPGKRNRIVR MPLKKGTKVM TIDGEAGCKK
LLGNIKNPEL GSMRILHLPN SWNHMQSDHF IVFRVLPISA QESIVTTKWF VHKDAVEGED
YDPNRLRYVW DATNDQDRIL GEENQRGINS IGYQAGPYSE TFEFGVMNFQ EWYTDTIQKN
LNK
|
|---|
| |