| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3949 |
|---|
| Symbol | |
|---|
| ID | 5368343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4455540 |
|---|
| End bp | 4456961 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640806337 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001342781 |
|---|
| Protein GI | 152997946 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.905833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGCC CCTTATACGA AAAAATTGCT AATCAAATTG AACATCAAGT TCATGAAGGT
ATTTTCTTAC CAGGAGCAAA AATCCCATCA GTTCGTAAAT CCAGCAAACA AATGGAAGTC
AGTGTTGCCA CTGTACTACA AGCCTATAGT TTGCTAGAAG ACAGAGGCGT CATAAAAGCC
CGTCCGCAAA AAGGCTACTT TGTTCAAGAA ACTCAGCTCC AGCCAACAGA ATATGCAAAA
ATTGAACCGA CTAAAAATGA TAGCACCATA CATGCTTTAC TACGGCGTTT ATTGCACGCC
TCACAAGATG GCAATATCAT TCAATTTGGC GCAGCTATCC CTAAAAGCCA GTTCCTACCA
ATACGACAGC TACAGCGCTC TGTTGGACGC CTAATGCGCT TAGAGCCAGA AATATGTGCA
GCTTATGAAT TCACCCCAGG ATCTCTCAGC TTACGTCGTC AGATAGCCAT CCGCATGCTA
GACAGTGGCT GCCAACTACA GCCCGATGAC ATTACTATTA CCTTAGGTTG CCAAAACGCT
TTGATGCTTT CGCTACAAGC CGTCGCAAAA GCTGGAGATA CCATTGCAAT CGAAAGCCCT
GCGTATCATG GGGTATTACA AATTATTGAA GTGTTGAAAC TGAAAGCCAT TGAGATTCCT
TGTTCCGCAG AAATAGGTAT AGACTTAGAT TTATTGGAAA ATGCAGCCAA AGAATGGGAT
ATCAAAGCAT GCGTAGTCAC ACCAAATAAT CAAAACCCAA TTGGCGCCAC ACTCAGCCAT
CAATCCAGAC AACGCATTCT CAGCCAATCG GTTCAATACG GTTTTACTCT GATTGAAGAT
GATGTTTATG GTGAGCTGAG CTATAAAGAC AAGCGCGAGC GATCCCTAAA AGCGGACGAC
AAACACAATA CTGTAATCTA CTGCAGCTCT TTTTCCAAAA GTATCGCTCC TGGGTTTCGC
ATTGGTTGGA TCGTCGGTGG GCCTTTTCAA ACTCAGATTG AACATTACGC TTATGTCCAA
TCCCTTGCGA TTCCTACATT AACTCAAACC GCTATCGCCA ACTTTCTAGA AAACGGTGCG
TATGATCGTC ATTTACGAAA AACCCGACTG TCTTATCAAA CCAACCTAGC CCGCTGTCAG
TCTCTCATCC AGGAGCATTT TCCTGCAGGT ACTAAAACCT CGACCCCAAA AGGTGGATTT
TTATTATGGG TCACTTTACC AGACACCGTA AATGCCATGA CACTTCATTC CCAAGCCTTA
GAAATTGGCA TTGGCTTGCT ACCAGGATTA GCATTCAGTT TAACCGCGCA ATTCGATCAT
CATTTTCGAC TAAACTACGC ACTAAATTGG GATAATAAAA CTGACGCTGC ACTAAAAGAA
CTCGGTAGAC TTTGCCAGCT CCAGCCCCCT AAGCTAGGCT AA
|
|---|
| Protein sequence | MDCPLYEKIA NQIEHQVHEG IFLPGAKIPS VRKSSKQMEV SVATVLQAYS LLEDRGVIKA
RPQKGYFVQE TQLQPTEYAK IEPTKNDSTI HALLRRLLHA SQDGNIIQFG AAIPKSQFLP
IRQLQRSVGR LMRLEPEICA AYEFTPGSLS LRRQIAIRML DSGCQLQPDD ITITLGCQNA
LMLSLQAVAK AGDTIAIESP AYHGVLQIIE VLKLKAIEIP CSAEIGIDLD LLENAAKEWD
IKACVVTPNN QNPIGATLSH QSRQRILSQS VQYGFTLIED DVYGELSYKD KRERSLKADD
KHNTVIYCSS FSKSIAPGFR IGWIVGGPFQ TQIEHYAYVQ SLAIPTLTQT AIANFLENGA
YDRHLRKTRL SYQTNLARCQ SLIQEHFPAG TKTSTPKGGF LLWVTLPDTV NAMTLHSQAL
EIGIGLLPGL AFSLTAQFDH HFRLNYALNW DNKTDAALKE LGRLCQLQPP KLG
|
|---|
| |