| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3843 |
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| Symbol | |
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| ID | 5365984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4336161 |
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| End bp | 4337384 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640806233 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001342677 |
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| Protein GI | 152997842 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000804532 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCCTT CTATTTTATA TTTTTCACCT CAGCTAGCAT CAAGGAAGGC ACAATTACAA
ACCCTCTTGT CAAAATATGT GCAATCTATT GAATGGCAAG CCGTACAAAG CATTGATCAG
TCACCTTTTC TATCTATTGT ATTACTTGCA GAAAAAGATA TAAAAGCATC TGACTGGCCT
CTTTTAGCAT CCAGAAAGAC CATAGTTATC CTCGACGAAT GGAGCTTAGA GCGTAGCATT
ACATGGATAC AAAAAGGGGT AGCAAACTGT TTTGCACTTG ATGACGAACA TCTTATTGCG
GGGCTGGTGG CTGAACTATC TACATTTTAT TTGAGTCCCG CCCATCAAAC AGAAGACGAT
ATTTTACAAG TCATTATTGA TGCGATTCCG GCACCAATTT TCTTTAAAGA TCATCTGCAT
ATTTACCGAG GCTGCAACAA AGCATTCAGC CAATCCTTAG GGGTTCCTCG TGAAAAAGTC
ATTGGCTATT CCGTATATGA AGTCGCCCCA AAACATCTTG CCGATAAATA TTACAAAGCG
GACTGTCAGT TACTGGCGCA AGGTGGCACC CAACGCTATG AGGCCCAAGT GCTATTTGCT
GATGGCACAT TGCATGAAAT TGAATTTAAT AAAGCCGTTT TTAAAAATGC TAAGGGTGAA
TCTGCTGGTC AAGTCGGTGT GATGCTGGAT ATTACCGAGC GCACCCAGCT GATGCGCAAA
TTAGACAAAG CAACACGCAC AGATCCACTA ACGGGGACAT CAAACCGCAG AGAGTTCAAC
CTCATCATCC ATGATGAACT GAACCTGCAA AAACAGTTTG AGAAAAAACT CTGCTTAATG
ACCCTAGATA TCGATTTCTT CAAAAAAATA AATGACAAAT TTGGTCATAG CGGTGGCGAT
CAAGCGCTTC AACTTATTGC CGAGTGGTTA CAAAAGAAGC TGAGATCAAC AGACACCTTA
TTTCGTGTTG GAGGCGAAGA GTTCTATATT TTAATGCGAG ATACAGATAT ACAAAACGCC
CTAAAAACCG CAGAGAGATT ATGTAAAGGC ATGGCGACTC ATACTTTCTT AATCAATCAA
CAATCAGTAC ACATCACACT GTCTGCTGGT GTTATTGAAT TAGCCCCAAC TACAGACCTA
GAAAGCGCCC TCGACATGGT AGACAAGGCA TTGTACGAAG CAAAATCAGA CGGAAGAAAT
TGCGTTTGTC CGGTATTTCA GTAA
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| Protein sequence | MTPSILYFSP QLASRKAQLQ TLLSKYVQSI EWQAVQSIDQ SPFLSIVLLA EKDIKASDWP
LLASRKTIVI LDEWSLERSI TWIQKGVANC FALDDEHLIA GLVAELSTFY LSPAHQTEDD
ILQVIIDAIP APIFFKDHLH IYRGCNKAFS QSLGVPREKV IGYSVYEVAP KHLADKYYKA
DCQLLAQGGT QRYEAQVLFA DGTLHEIEFN KAVFKNAKGE SAGQVGVMLD ITERTQLMRK
LDKATRTDPL TGTSNRREFN LIIHDELNLQ KQFEKKLCLM TLDIDFFKKI NDKFGHSGGD
QALQLIAEWL QKKLRSTDTL FRVGGEEFYI LMRDTDIQNA LKTAERLCKG MATHTFLINQ
QSVHITLSAG VIELAPTTDL ESALDMVDKA LYEAKSDGRN CVCPVFQ
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