| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3831 |
|---|
| Symbol | |
|---|
| ID | 5366669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4319360 |
|---|
| End bp | 4320199 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806221 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001342665 |
|---|
| Protein GI | 152997830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.9964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.26291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAT GGCAACAACA AACCTGTTTA TTAACTGGCG CGACGGGCGG TATAGGCCAA
GCCATCGCGA AAGCCTTAGC CAACAAAGGG GTAAGCTTGA TACTGCAAGG TCGAAGTGAA
TCTCGCTTGC AACAACTTAG TGACTCTCTG CCTGGCGAAC ATAAGATACT CGTGGCAGAC
ATCACCACAA TACAAGGCCG TGAAAAAATC TGCCGCATGG CTGAATTGAA CGCAATCAGT
ATGTTGATTA ATAACGCAGG CGTTGGGCAG TTCTCTTTAC TGGAAGAGAC AGAAGAAACC
GTCATTGTAG ACACCTTAGA AATCAACTTA TTAGCACCAA TTCTACTTAT TCAAGAATTA
CTGCCTTTGT TGCAAAAAGC CGATCAACAG CAACCAGCAC CGTCATACGT GATCAATGTT
GGCTCAGCGT TTGGCAGCAT AGGTTTCGCT GGACAATCGA TTTACTGCGC CAGCAAATTT
GGTCTACGAG GTTTTACTGA AGCCTTGTTC CGTGAATTAG CAGATACGAA TGTCCATGTT
AGTTACTTTG CGCCACGAGC AACCGCCACC AGCATTAACA GCGATCAAGC AATGGCGATG
AACAAAGCCC TGGGCAATAG CGTAGATTCA CCAGAGAGCG TTGCTAACGC CCTTATTCAA
CAACTTGAAA AAGGTCACGC CAGACTGTTT GTCGGTTTTC CTGAAAAGCT CTTTGTCAAA
ATCAACGGTG CTTTTCCACA TATTGTGGAC AAAGCTCTGT TTAAAAAACT TCCCATTATT
AAACGCTTTC TACGTCGTGA AAAAGACGTC GAGCAAACCG CACAAGAGGT ATTATCATGA
|
|---|
| Protein sequence | MMQWQQQTCL LTGATGGIGQ AIAKALANKG VSLILQGRSE SRLQQLSDSL PGEHKILVAD
ITTIQGREKI CRMAELNAIS MLINNAGVGQ FSLLEETEET VIVDTLEINL LAPILLIQEL
LPLLQKADQQ QPAPSYVINV GSAFGSIGFA GQSIYCASKF GLRGFTEALF RELADTNVHV
SYFAPRATAT SINSDQAMAM NKALGNSVDS PESVANALIQ QLEKGHARLF VGFPEKLFVK
INGAFPHIVD KALFKKLPII KRFLRREKDV EQTAQEVLS
|
|---|
| |