| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3804 |
|---|
| Symbol | |
|---|
| ID | 5369028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4285767 |
|---|
| End bp | 4287065 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640806194 |
|---|
| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
|---|
| Protein accession | YP_001342638 |
|---|
| Protein GI | 152997803 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.725364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTG AAATTGCAAC ATATCTACTA GTTTCCTCTA TTTTTGGCTT GTTGTTATTG
GGGATACCTC TCGCATTTGT TACAGGAATA GTGGCTGTTA TTTTTACGGT TGGTTGGTTT
GGAACCTCTG CAATACCTTT GGTAGGAAGT CGTATTTATG GATTCATAAC CGAATATTCT
TTAGTAGCTG TTCCTATGTT TGTGTTTATG GCTGGATTAT TAGATCGTTC TGGTATGGCA
AAAGATCTAT TTAATTCTAT GAGAGTTTTT TCTGGGCGTT TACCTGGTGG TGTTGCGGTG
CAAACACTTG TGGTTGCTTT TTTCTTAGCG GCTATCTCAG GGATTATTGG TGGAGAAATT
GTACTTTTAG GTGTTTTAGC GTTACCTCAA ATGTTACGAC TCGGCTACAA CAAGAAAATT
GCAATAGGGG TAGTTTGCGC TGGTGGATCA TTGGGAACAA TGGTTCCGCC ATCTATAGTT
TTGATTATTT ACGGTCTTAT CTGTGGTGTT TCTATAGCGG ATTTATTTAA GGCCGCTTTT
ACCCCTGCAT TTATTTTGAT GGCTGCATAC ATGTTATATG TTGTCTTCAT TTGTTGGAAA
AATCCTGAAA TGGGTGGTGG TCGTAATCAT GAAGAAACCC AGACAAAAAT TGATTTTTTG
TCTGCCATCA AGGGTGTGTT TTTTCCGGTT GTAATTGCAG GTATGGTGTT AGGTAGCATC
TATGGTGGTA TTGCTTCAGT AACCGAGGCT GCTGCAATGG GGGCTGCAGC TGTATTGTTT
GCAGTTTGGT TTCGCGGCGA GTTCAGTTTT ACTTTGTTAA AAAATAGTCT CACGCAAACA
TTAGAAACCT GCGGAATGAT TGTCTGGATT GGTATTGGTG CAGCCTGCTT AGTTGGGGTT
TATAACTTGA TGGGAGGAAA TCGTTTTGTT TCTTCTACTA TCTTGGGCCT AGACGTCGCT
CCTATCGTAA TTATTTTGGT CATGATGTTG ATCTTTTTAC TATTAGGGAT GTTTCTTGAC
TGGATCGGTA TTGCTATGTT GTGTTTGCCT ATTTTTCTAC CAATAGTGAC TCAACTTGGC
TATGACCCTG TATGGTTTGG GATTCTTTTT GCAATCAATA TGCAGGTCTC TTACATAAGT
CCTCCATTTG GGCCTGCTGC CTTTTATCTT AAAAGTGTTG CGCCTCCTGA AATTACCCTT
AAAGATATTT TTGTTTCAAT GATTCCTTTC ATTGCTATTC AACTTTGTGT TTTAGGGCTG
ATGTTAGCTT ATCCCCAGAT AAGTATTTGG CCACTATAA
|
|---|
| Protein sequence | MTIEIATYLL VSSIFGLLLL GIPLAFVTGI VAVIFTVGWF GTSAIPLVGS RIYGFITEYS
LVAVPMFVFM AGLLDRSGMA KDLFNSMRVF SGRLPGGVAV QTLVVAFFLA AISGIIGGEI
VLLGVLALPQ MLRLGYNKKI AIGVVCAGGS LGTMVPPSIV LIIYGLICGV SIADLFKAAF
TPAFILMAAY MLYVVFICWK NPEMGGGRNH EETQTKIDFL SAIKGVFFPV VIAGMVLGSI
YGGIASVTEA AAMGAAAVLF AVWFRGEFSF TLLKNSLTQT LETCGMIVWI GIGAACLVGV
YNLMGGNRFV SSTILGLDVA PIVIILVMML IFLLLGMFLD WIGIAMLCLP IFLPIVTQLG
YDPVWFGILF AINMQVSYIS PPFGPAAFYL KSVAPPEITL KDIFVSMIPF IAIQLCVLGL
MLAYPQISIW PL
|
|---|
| |