| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3792 |
|---|
| Symbol | |
|---|
| ID | 5366663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4269564 |
|---|
| End bp | 4270784 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806182 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_001342626 |
|---|
| Protein GI | 152997791 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000577388 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAT CTGCTTTTTA CCAAAACCTA GAAAACCAAC TCCAAACACT TAAGCAAGAA
GGCCTTTATA AAGTAGAGCG TCCACTTATC ACGCCACAAG CGAGTCAAAT CACCACCGCC
GACAAAACGC CTTTAATAAA CCTTTGTGCA AACAACTACC TTGGGCTAGC AAACGATAGC
CAAGTCACCA AAGCGGCTCA TCAAGCGCTG GATGTATACG GTTACGGCAT GGCTTCAGTA
CGCTTTATTT GCGGCACACA AAGCATTCAT ACTCAACTAG AGAAAAGCCT GAGTGATTTC
CTACAAATGG AAGATACTAT TTTATATTCT TCTTGCTTTG ATGCGAATGG AGGATTATTT
GAAACCTTAT TAAGCCAAGA AGATGCTGTC ATCAGCGACG CACTCAATCA CGCCAGTATC
ATTGACGGCA TTCGCTTATG TAAGGCAAAG CGCTATCGCT ACGCCAACAA TGACATGAAA
GAACTAGAAG CTAATCTAAA ACAAGCGGAT GAGGACGGTG CGAAAACCAA GCTTATTGTG
ACCGATGGTG TCTTCTCTAT GGACGGCATC ATCGCCGACC TTAAATCTAT CTGCGACCTT
GCAGACAAGT ACGACGCCTT AGTCATGGTA GATGATTCCC ATGCAGTAGG CTTTTTAGGC
GAAAACGGCC GTGGTAGTCA CGAATATTGC AATGTACTAG GTCGCATCGA CATTATCACT
GGCACATTAG GTAAAGCCCT TGGTGGCGCG TCTGGCGGCT ACACTAGCGC CTCTAAAAGC
ATTGTAGATT GGTTACGCCA GCGCTCTAGA CCTTATCTTT TTTCTAACTC ACTTGCCCCA
GTAATCACCG CCACCAGCTT ACAAATTATC GAGTCTCTTA AAAAAGGCGA TTCAGCCCGC
AAACAACTCA AAGCAAACAG TCAATACTTC CGCGCCCAAA TGAACGTTTT AGGCTTCAAC
CTTGTACCTG GTGATCACCC TATTATTCCT GTTATTTTAG GCGACGCAAA GCTCGCACAA
GAGATGGCAA ATGCGCTATA TAAGGAAGGG ATCTTTGTAA CAGGATTTGC CTACCCAGTC
GTACCAATGG GAAAAGCCAG AATCCGTACT CAGATGTCAG CGTCACTAAC AACGGAACAA
CTTGATCTCG CCATAGCCGC CTTTGCAAAG GTAGGCCGTG AGATGGGTAT CATTAAAGGA
AGGATGGAAG GAAACAAATA A
|
|---|
| Protein sequence | MSKSAFYQNL ENQLQTLKQE GLYKVERPLI TPQASQITTA DKTPLINLCA NNYLGLANDS
QVTKAAHQAL DVYGYGMASV RFICGTQSIH TQLEKSLSDF LQMEDTILYS SCFDANGGLF
ETLLSQEDAV ISDALNHASI IDGIRLCKAK RYRYANNDMK ELEANLKQAD EDGAKTKLIV
TDGVFSMDGI IADLKSICDL ADKYDALVMV DDSHAVGFLG ENGRGSHEYC NVLGRIDIIT
GTLGKALGGA SGGYTSASKS IVDWLRQRSR PYLFSNSLAP VITATSLQII ESLKKGDSAR
KQLKANSQYF RAQMNVLGFN LVPGDHPIIP VILGDAKLAQ EMANALYKEG IFVTGFAYPV
VPMGKARIRT QMSASLTTEQ LDLAIAAFAK VGREMGIIKG RMEGNK
|
|---|
| |