| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3704 |
|---|
| Symbol | |
|---|
| ID | 5366640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4179493 |
|---|
| End bp | 4180491 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806087 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_001342540 |
|---|
| Protein GI | 152997705 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TATTTACTCT GCTAACCGCT GCTGCCGCCA TTTCTCTCGC TGGATGCAGT
GATGACTCAG CCAAATCTGA TACCATAAAA ATCGTTGCTG CCCACAATCA AACCAACCTC
TCTAGCCCAT ACCAAACTGG CATGCTAAAA CTGAAAGAAG TCGCTGATAA ATCAGGTCTT
TTCAATGTAG AAGTACACGC TGGAACCATT GGTACCAATG AAAATGAATT GGTTGAAAAA
CTGGTACTTG GCGGCGCGGA CATGGTTCTG GTTTCACCAG GCTTTATGAC ATCATCAGGT
ATTGAAGAAG TTGACTTGTT CTCTTTGTTG TACTTGTTTA ACGATTACAG CCATTGGGAA
AAAGTGGTTG ATGGCAAAGT AGGTAAGGAT ATTGCCGACA TCATCTATAC CAAGTCTGGT
GAAAAGTACC GTGTCGCCGC TTATTGGACT GCCGGTGTGC GTCACTGGTA TGGCAAGCAA
CCGGTTAATT CCTTTGCTGA CGTAAAAGGC ATGAAAATCC GTACTCAAAC GTCCGGCGTA
GTATCTCAAT ACTGGAAAGA AATCGGCGCT GTACCAACCT CTGTTGCTTG GGCCGAACTT
TACCAAGCAC TATCAAGCAA TGTAGTTGAT GCTGCCGAAA ACGCTTATCC CTACTTCATT
CCAATGGAAC ACCACAAAAC TGCCAACGGT AAGTACATTT CTGAAACCGG TCATGACTAC
ACCACACGTC TATTGCTAGT GCGTAATTCA GTATGGGAAG GCTTCAATGA TGAACAGCGT
ACGGCCTTCA ACCAAGCAGT AAAAGAGGCG ACTCAAGCGG AACGCCAAGC GTTATACAGT
GAAGAATCTA CTTACAAGCA AAAAGCCATT GATGATGGCG CCATCGTCAA TACGTTAGAC
CGCACTCCTT TCATTGAAAA AGCACGATCT ATACAAGATC AGTGGGCGGC AAAAAATGGC
ATGACAGAGG TTCTTGAGAC CATCCGTCAG ACTAAATAA
|
|---|
| Protein sequence | MKKLFTLLTA AAAISLAGCS DDSAKSDTIK IVAAHNQTNL SSPYQTGMLK LKEVADKSGL
FNVEVHAGTI GTNENELVEK LVLGGADMVL VSPGFMTSSG IEEVDLFSLL YLFNDYSHWE
KVVDGKVGKD IADIIYTKSG EKYRVAAYWT AGVRHWYGKQ PVNSFADVKG MKIRTQTSGV
VSQYWKEIGA VPTSVAWAEL YQALSSNVVD AAENAYPYFI PMEHHKTANG KYISETGHDY
TTRLLLVRNS VWEGFNDEQR TAFNQAVKEA TQAERQALYS EESTYKQKAI DDGAIVNTLD
RTPFIEKARS IQDQWAAKNG MTEVLETIRQ TK
|
|---|
| |