| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3640 |
|---|
| Symbol | |
|---|
| ID | 5365462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4113133 |
|---|
| End bp | 4115259 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640806023 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001342477 |
|---|
| Protein GI | 152997642 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.168279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0985281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA AAAGCGCTCT TCCCTTTAAG TTAAAGCAAA GCCACTGCGC TGTCGCGACA
CTTTTCTGCT GCTCCGCACT CACACCAATT GCTGGGTATG CAGAAACAGA AAATGAGGCA
GGCACCTTTC GACTTTCCCC TATCATCGTC AATGATCAAG CATTAGCCGA TGATGACTCA
GAATCTGTTG TGGCCAAAGA ACTATGGGTC GGCGGCAAAG TCGCTACTAG CATTCAAGAC
ACGCCCGCGT CTGTCTCTGT CATTACTGAA AAAGAAATCC AGCAGCGTAA CGCCAGCACC
ACAGAAGAGG TTTTGCAGTA CTCTCCAGGA TTGGTTACTG ACTATTATGG AACCGATGAC
CGCAACGATT ATTTTATGAT TCGAGGATTT CAAGCAACCA CCTATCGCGA CGGTATGACG
TTGGGTTCTA TGCGTGGCGT ACGTGAAGAC CCTTATGCTT TTGAACGTGT GGAAGTCTTA
CGCGGTGCTA ACTCCACTCT ATTTGGCCCC GCAGACCCAG GCGGATCAGT AAATTTCGTT
AGCAAGCGCC CAAAATTTGA AAGTATCAGA AATACTTATG TTACCTATGG TTCTAACGAC
CATAAAGAAG TGGGTATCGA TGTCGGTGAC ACATTAAATG AAAACGAAAC CCTAGCCTAC
CGACTAACAG GCAAGGTAAA AGACAGCGAC CGAGAATACG ATTATTCCAA AGATGATTCT
GAGTTCATCA TGGGTGGATT AACATGGGAA CCAAACAGCA GCACCAGCGC GACACTTTTA
ATTGACTACT TGAATACAGA TTCAACACCA AACAGCGGCG GCTATCCGCT TGATAAAGAG
TACGATCGCA GTAACTTCTT TGGCGAACCA GACTACAACA ATCATAGCGT TGAGCGAACC
AATATCACAG CACAAATTAC CCATCGTATT AATCGCCAAT TAAAAGTACT AGGCAACTTA
CGCTACAGCG ATTTAACCGA TGATTTTGGC TACATTTATC TCTCCGACAC AGCTGGTCGT
GTCGGCAGCA CTGTAAATAG ATACCGCTAT GGATCGGATA CCAACGCTCA AGAGTTTATT
GGTAATACAA TGCTGCAATA CGATGCTAGC TTTGACAGTG TAGACAGTAG TACGACGGTA
GGTATTGAAT ATCGTGATGC ATCAAGTGAT ATAACAACAG CTGACGGCTC TGTAACTTCA
ATTGATATAG CCAACCCTAT TTATACAGGT AAGCCAAACT TTCCCCTTAG CAGTGATAAC
AAAAAAGACT ACACGACAAA ATCCATTTTT CTGCAACAAA ACCTATCATT TGATGATAAA
TACATTGTCA CGCTCGGTGT TCGAAACGAC GCTTTAAATC TGTCAAATAA AAATAATCTA
ACTGGAGTCA AAGCGAATGA AAGTTTTTCA GAAACAACTC TCCGTGGCGC CCTTACTTAT
AAAATAAATG ATAAGTTGTC TGCTTACTTA AGCCAAGTTG AATCTGTTGC TCCACCATCA
ATTGATAGTA ATGGTAGTGC TAATAAACCC GAACGAGGCG AACAACTCGA AGTCGGTATC
AAATACGCAC CTTACGAAAT GAACGCAATA TTTTCAGCTT CTGTATATGA CCTAACTAGA
AATAACGTTC CTATTAGAAT CATTCGCAAT GGTGTCATTA GTACTGATCC AGAATCTATT
GGTAAATCAA AAACACAAGG ATTGGACCTA GAGGCAAGAG CCGACTTAAC GGAAAACCTG
AACATTAGTG CAGGCTACTC TTATATGAAA TCGGAAGTAG TGAAAGGAAC ACTACGAAAT
GGGAGCTCAA TTAAAGGCAA TGAATTTGTC ACAGCACCAC GAAGTACCGC TTCTTTGTGG
AGCCACTACA CACTACCTAA TCAAACAATG AGTATTGGTC TTGGGGCACG TTATGTTGGG
TCTTATTACT TTGACGCTGT GAACACATCT AAAAGTGAAG CGGCAACACT ATTTGATGCG
GCTTTTGATT ACCAAATCAC CGCAGACACC AAGCTAGGCT TAAATATTAA AAACCTACTG
GATAAGCAAT ATGTAGTCGG TTCGGGTACT GCAAATTACT ACAACCCAGG CCGAGACATC
ACTCTCACCT TAAACCACAG CTGGTAA
|
|---|
| Protein sequence | MNKKSALPFK LKQSHCAVAT LFCCSALTPI AGYAETENEA GTFRLSPIIV NDQALADDDS
ESVVAKELWV GGKVATSIQD TPASVSVITE KEIQQRNAST TEEVLQYSPG LVTDYYGTDD
RNDYFMIRGF QATTYRDGMT LGSMRGVRED PYAFERVEVL RGANSTLFGP ADPGGSVNFV
SKRPKFESIR NTYVTYGSND HKEVGIDVGD TLNENETLAY RLTGKVKDSD REYDYSKDDS
EFIMGGLTWE PNSSTSATLL IDYLNTDSTP NSGGYPLDKE YDRSNFFGEP DYNNHSVERT
NITAQITHRI NRQLKVLGNL RYSDLTDDFG YIYLSDTAGR VGSTVNRYRY GSDTNAQEFI
GNTMLQYDAS FDSVDSSTTV GIEYRDASSD ITTADGSVTS IDIANPIYTG KPNFPLSSDN
KKDYTTKSIF LQQNLSFDDK YIVTLGVRND ALNLSNKNNL TGVKANESFS ETTLRGALTY
KINDKLSAYL SQVESVAPPS IDSNGSANKP ERGEQLEVGI KYAPYEMNAI FSASVYDLTR
NNVPIRIIRN GVISTDPESI GKSKTQGLDL EARADLTENL NISAGYSYMK SEVVKGTLRN
GSSIKGNEFV TAPRSTASLW SHYTLPNQTM SIGLGARYVG SYYFDAVNTS KSEAATLFDA
AFDYQITADT KLGLNIKNLL DKQYVVGSGT ANYYNPGRDI TLTLNHSW
|
|---|
| |