| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3611 |
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| Symbol | |
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| ID | 5366136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4076590 |
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| End bp | 4077573 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805987 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001342448 |
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| Protein GI | 152997613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.354938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00827113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAGC GCATAGTAAA AGAAGCCCAA GTCCCTTTTG ATTTGGGTGG TAATCGTTTC
GATCAGATCG CTACAGAATT GTTTAGTGAC TATTCTCGAT CGCGTATACA GAGCTGGATT
AAAGAAGGTG TCTTGAAGGT CGATGGTAAA ATCACTAAAC CAAAAGAAAA ATTATTTGGT
GGTGAAGTGG TGACATTGGA CATTGTTATC GAAGCTCAAG AAGAGCATGA AGCTCAAGCA
ATGGATCTCG ATGTAGTTTA TGAAGATGAT GACATCATGA TCATAAACAA GCCTGCGGGT
TTGGTTGTGC ATCCTGCGGT GGGCAACCGA GATGGCACCT TAATGAACGC GATCCTTCAT
CATGCACCAG AGACGGCTCA TATTCCACGT GCTGGTATAG TGCATCGCCT TGATAAAGAA
ACCACTGGTT TGATGGTGGT AGCTAAGACA TTGGCAGCAC AAACTGATCT TGTGATGCAG
TTACAAGAGC GTAGTATGGG TCGTGAATAT GAAGCTGTTT CTATTGGTGT GATGACTGGC
GGTGGTGTTG TGGATGAACC TATTGGTCGT CACCCTCATA ATCGCCAAAA ACAAGCAGTA
GAGCCTGTTA ATGGTAAAGA TGCTGTAACG CACTATCGCT TAGTTGAGCG CTTCAAAAAT
CACACGCATA TTCGTTTAAA GCTAGAAACA GGGCGCACTC ATCAGATTCG TGTTCATATG
GCGTTTATTC AATATCCGTT GGTTGGCGAT CCTCAATATG GTGGTCGTTT GAAAATGCCT
AAGGCGTGTT CTCCTGAGCT GCAGGATGAA CTACGTCATT TTCGTCGGCA AGCATTGCAC
GCTAAAAAAT TAGAATTGTC TCATCCTATT ACAGGCGAAT GGATGGAATG GGAAATTGAC
TTGCCAGATG ATATGAAGAA ACTATTAGAT GCTCTTAAGA AAGATATGGT GGAGTCAGGT
AGTAACGACT CTGAGTATTT CTAA
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| Protein sequence | MAERIVKEAQ VPFDLGGNRF DQIATELFSD YSRSRIQSWI KEGVLKVDGK ITKPKEKLFG
GEVVTLDIVI EAQEEHEAQA MDLDVVYEDD DIMIINKPAG LVVHPAVGNR DGTLMNAILH
HAPETAHIPR AGIVHRLDKE TTGLMVVAKT LAAQTDLVMQ LQERSMGREY EAVSIGVMTG
GGVVDEPIGR HPHNRQKQAV EPVNGKDAVT HYRLVERFKN HTHIRLKLET GRTHQIRVHM
AFIQYPLVGD PQYGGRLKMP KACSPELQDE LRHFRRQALH AKKLELSHPI TGEWMEWEID
LPDDMKKLLD ALKKDMVESG SNDSEYF
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