| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3588 |
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| Symbol | |
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| ID | 5367678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4049386 |
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| End bp | 4050639 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805959 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001342425 |
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| Protein GI | 152997590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.776676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTTTT TTAATTATTC GAATCAGACT CTGCATGCAG AGGATGTTGC CTTGTCAGAT
GTTGCTAATC AGTATGGTAC GCCTTGTTAC GTATATTCTC GTGCCACTCT TGAACGTCAC
TATAAAGCTT ACGCAGATGC ATTCGCATCA CACCCAACCT TGATCTGCTA TGCGGTGAAA
GCTTGTTCTA ATATTGCGAT TTTGAATGTC TTAGCTCGCT TGGGATCGGG CTTCGATATT
GTATCTGTAG GCGAGCTTGA GCGTGTTTTA AAAGCTGGCG GCGAACCTTC AAAAGTCATG
TTCTCCGGTT TAGGTAAGCA AGCAGAGGAA ATGCGTCGGG CGTTAGAGGT CGGTATTCAT
TGCTTTAACG TTGAATCTGA AGCGGAATTA TACCGATTGG ATAAAGTTGC TGGCGAAATG
GGCAAATTGG CCCCTGTGTC TTTGCGCGTG AATCCAGATG TCGATGCTAA AACTCATCCT
TATATTTCAA CGGGTTTGAA AGAGAACAAG TTTGGTATCG ATATTAAAGA CGCGGTTCGT
ATCTACAAAA TTGCCCATGA ATTACCTAAC TTAAATGTTA TGGGCGTAGA TTGTCACATC
GGCTCACAAT TGACAGAACT AAAGCCTTTC TTAGATACAT TTGATCGTCT GATTGGTTTG
GTAGATGAAC TAGCTGAAGT CGGCATTACA ATTAAACACC TTGATCTAGG TGGCGGGTTG
GGTGTTCGTT ATCGTGACGA AGTACCACCA GAGCCTGCAG ATTACGCTAA GCTACTGCTT
GAGAAAGTAA AAGGTAGAAA TTTCGAACTG GCTTTTGAGC CAGGTCGTTC TATCGCAGCG
AACGCTGGTA TTTTATTAAC TCAAGTTGAG TTTTTGAAAT GCAATCCGCA TAAAAACTTC
GCCATCATTG ACGGTGCGAT GAATGACCTT ATCCGCCCAT CTTTATACGG CGCATGGATG
AACATTGTTC CTGTATCTTT GTTGCCAACG GCAGAGGGTA AGCGTAACTA CGATCTTGTT
GGTCCTATTT GTGAGACTGG CGATTTCTTG GGTAAAGATC GGGAATTGGA TATTCAAGCT
GGTGATCTAT TGGCTGTGCG TTCTGCTGGA GCTTATGGCT TCACCATGTC ATCAAATTAC
AATAGCCGTA ATCGTGCAGC GGAAGTCATG GTCGATGGTG ATAAAACCTA TTTGATTCGT
GCTCGTGAAA CGATTGAACA TCAGTTAGCT GGTGAGCAAA TCTTGCCAGA CTAA
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| Protein sequence | MDFFNYSNQT LHAEDVALSD VANQYGTPCY VYSRATLERH YKAYADAFAS HPTLICYAVK
ACSNIAILNV LARLGSGFDI VSVGELERVL KAGGEPSKVM FSGLGKQAEE MRRALEVGIH
CFNVESEAEL YRLDKVAGEM GKLAPVSLRV NPDVDAKTHP YISTGLKENK FGIDIKDAVR
IYKIAHELPN LNVMGVDCHI GSQLTELKPF LDTFDRLIGL VDELAEVGIT IKHLDLGGGL
GVRYRDEVPP EPADYAKLLL EKVKGRNFEL AFEPGRSIAA NAGILLTQVE FLKCNPHKNF
AIIDGAMNDL IRPSLYGAWM NIVPVSLLPT AEGKRNYDLV GPICETGDFL GKDRELDIQA
GDLLAVRSAG AYGFTMSSNY NSRNRAAEVM VDGDKTYLIR ARETIEHQLA GEQILPD
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