Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3558 |
Symbol | |
ID | 5368739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 4017934 |
End bp | 4018554 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640805929 |
Product | NUDIX hydrolase |
Protein accession | YP_001342395 |
Protein GI | 152997560 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.324606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.411557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA AACCGACGTA CAGCAAAAAA GATGTTGAGG TATTAGCTGA CGAATGTCTT TACAAAGGCT TCTTTGAAAT GCGTAAACTG ACCTTGAAAC ATAAAAAGTT TAACGGTGAA TGGAGCCAGC CCATGACCCG AGAAATGATG GTGCGTAACG ATGCTGTATG CGTGTTGCTG TTTGACCCTA TTGAGGACAA AATCCTATTA ATTGAACAGT TTCGTCCTGC TGTATTTAAA AGTGAATCAC CATGGTTGCT GGAATTAGTG GCTGGAATGG TGGAAGAAGG TGAAAGCGAT GAAGACGTAG TGCGCCGTGA ATCTTTAGAA GAAGCGGGAG TGACGGTAAA GCGTCTTGAA TACATGTTTA AGTTTGTGCC GTCGCCGGGC GGATTAGTGG AGTACTTACG CATGTATGCC GGAGAATTTG ATTCAAACTT AGTAGATACC ACGAAAGTTC ATGGCTTGGA CGAAGAAAAT GAAGACATCA AATTGCATCT GGTATCTTCT GATGACGCCA TTGCCTTGCT TAAGAATGAT GTAGAAAATG CCAGCACTAT CATGGGATTG CAGTGGTTTG CGCTAAATAA AAACGATCTG ATAAAACGTT GGTGCGCTTA A
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Protein sequence | MKFKPTYSKK DVEVLADECL YKGFFEMRKL TLKHKKFNGE WSQPMTREMM VRNDAVCVLL FDPIEDKILL IEQFRPAVFK SESPWLLELV AGMVEEGESD EDVVRRESLE EAGVTVKRLE YMFKFVPSPG GLVEYLRMYA GEFDSNLVDT TKVHGLDEEN EDIKLHLVSS DDAIALLKND VENASTIMGL QWFALNKNDL IKRWCA
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