Gene Mmwyl1_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3506 
Symbol 
ID5367442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3954220 
End bp3954942 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID640805878 
ProductRNA methyltransferase 
Protein accessionYP_001342344 
Protein GI152997509 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.899672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATA AAGTAAGAAT TGTCCTTGTT AATACATCGC ACCCTGGCAA CATTGGTGGC 
GCTGCTCGTG CAATGAAAAA CATGGGGTTA GCAGATCTGT ATCTTGTTGC ACCTAAGGAA
TATCCTAGTG ATGAAGCAGT AAGCCGTGCC TCTGGCGCGA CTGATATTTT AGATAATGCC
GTTATTGTGA ATACTTTAGA AGAAGCCTTG GCTGATTGTC AGCTAGTCAT CGGCACCAGT
GCTCGCGAAC GTAATATTCC TTGGCCTTTG GTAGATCCAA GACAAGCTGC AGACTTAGTA
TTTGATGAAG GCTTGGTTAC GGCATTTGTG TTTGGTCGAG AAGACCGAGG GTTAACCAAC
GAGGAATTAC AACGCTGCAA TTACCACGTG CATATTCCTT CAGTTGAGAC CTTTAGTTCA
TTGAACTTGG GTGCAGCAGT ACAAGTTATC GCCTATGAAT TACGTATGAA GACGTTATTG
ATGAAAGATG CTCCTGTTGT CGCTAGTAAA TGGGATGTGC CTGCGGCAAA TATTGAGCAG
ATTGATTATT TGCTTGAGCA TTTAGAGAAA GTTTTAGTTC AGACAGAGTT TCTTGATCCA
GAAATGCCAA TGCAAGTGAT GACGCGTTTT CGCCGTATGT TTCAGCGTTC GCGATTGGAT
CAGCAAGAAG TTGGAATGTT AAGAGGTATG CTTACCTCAA TGGAAAAGAA AATGAAGTCT
TGA
 
Protein sequence
MQNKVRIVLV NTSHPGNIGG AARAMKNMGL ADLYLVAPKE YPSDEAVSRA SGATDILDNA 
VIVNTLEEAL ADCQLVIGTS ARERNIPWPL VDPRQAADLV FDEGLVTAFV FGREDRGLTN
EELQRCNYHV HIPSVETFSS LNLGAAVQVI AYELRMKTLL MKDAPVVASK WDVPAANIEQ
IDYLLEHLEK VLVQTEFLDP EMPMQVMTRF RRMFQRSRLD QQEVGMLRGM LTSMEKKMKS