Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3498 |
Symbol | |
ID | 5367072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3945769 |
End bp | 3946665 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640805870 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001342336 |
Protein GI | 152997501 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00180927 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAC TACAAGCGAT GAAGGTGTTT TGCCGTGTTT ATGAGGCGGA GAGCTTCAAG TTGGCAAGTG ACTCTTTGGG GATTTCTCGC CCTATGGTGA CACGTTATAT AAATTCCATT GAAGAGGAGT TAGGGACGAA GCTTTTGCAG CGCAATACTC GCAATATCAG TATTACTCAT GCTGGTCGTA AGTATTATCA ACATTGTATC GCAATACTCG ATGCGATTGA GGAGGCAGAA AATGAAATAG GTGATCTTAC GCAAAAGCCA AAAGGGCTAT TGAAAATAAG TGTGCCAATG GATTTTGGCT TATCTCATAT TGTTCCTTTG TTGGATAACT TTAGTCGTTT ATATCCTCAA ATTGAATTGG ATGTTGATTT CAGTGATAAG CGTGTTGATA TGACCGAGTC TGGTGTAGAT ATAGCGATTC GAGGAGGGGA TTTAGGCGGG GATCAATTTG TGGCGCGGCC TTTATGTTAT TCCAAGGGAT TTGTATGTGC GTCACCAGAT TACATTTTAA AGTATGGAGA ACTTGATCAT ATAGAGGACT TAAAAAATCA TTCCTGTCTT TTGTATAGCA ATGCACTGGT GCCAAAGCGT TGGTCATTGA CGGATGAGAA TGGGGTGTCT CAAACTGTCT CAGTTTCTGG TGCCTTTACT GCGAACAATG GTGGGGCTTT AACGCGTTTT GCTTTGGCTG GATTGGGGAT AATTTATCAA CCTGATTTTT TGATAGCAAA ATATATTGAG TCAGGTGAAT TAGTCAATTT ATTGCCAAAC TACAAAGGCT ATGAAATCAG TTTTTATGCT ATCTACCCAC AGCGAAAGCT GATGTCTAGA AAGACTCGAT TGTTGCTGGA TTTTTTACAA GAAGAGCTAG CCAATACGAA ATTTTAA
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Protein sequence | MDKLQAMKVF CRVYEAESFK LASDSLGISR PMVTRYINSI EEELGTKLLQ RNTRNISITH AGRKYYQHCI AILDAIEEAE NEIGDLTQKP KGLLKISVPM DFGLSHIVPL LDNFSRLYPQ IELDVDFSDK RVDMTESGVD IAIRGGDLGG DQFVARPLCY SKGFVCASPD YILKYGELDH IEDLKNHSCL LYSNALVPKR WSLTDENGVS QTVSVSGAFT ANNGGALTRF ALAGLGIIYQ PDFLIAKYIE SGELVNLLPN YKGYEISFYA IYPQRKLMSR KTRLLLDFLQ EELANTKF
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