Gene Mmwyl1_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3486 
Symbol 
ID5366755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3931533 
End bp3932291 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID640805858 
Producthemolysin A 
Protein accessionYP_001342324 
Protein GI152997489 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.72701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTA TCGACCTAAT CCTTACCGAG CAAGGCCTTG CTAAATCTCG CTCGCAAGCA 
CAAACTTTTA TCAGTGAAGG ACGAATCTCA TACAAACAAA ACGAGAAGTG GATAAAAGTC
ACCAAACCTA GCTTGAAATT GCCATCCGAT ATCGAGCTGA ACGTCATCTC AGACGAGGCC
GATAAATACG TTTCCCGTGG CGCCTTGAAA CTTGAAGGTG CTCTACTACA CACAAAACTC
AATATCGAAG GCTTCCTTGT ATTAGATATC GGCCAATCTA CCGGTGGCTT TAGTGATTGC
GCGATTCAGC ACGGTGCAGC ACATGTTGTT GGTGTTGAGG TCGGACATGA TCAACTGGAC
CCCCGCCTAC GTAATCATCA AAATATTATC TGCCTAGAAG GAATTAATGC TCGAAACTTG
AGTGTTGAAG ACCTAAACGA ACACTTTCCA GAACACGGCT TTGATCTTAT TGTCATGGAT
GTTTCTTTTA TATCGCAGAC TAAAATTTTG CCACAGCTAC CAAATTTACT AAGTAAAACA
GGTCACCTGA TTACATTAGT AAAACCTCAA TTTGAAGTAG GCAAAGAATT CATCGGTAAA
GGCGGAATAG TAAAAGACAA ACAGCGTGTA AAGTTACTCG AACAGGACAT GCAAGACTTC
GTCAAAAGAC TAGGCTTTGA AGTCAAATGC TATATAGAAA GCCCAATCAA AGGCGGTGAC
GGTAATCAAG AATTTCTACT TTGGGCAACC AGATCATAG
 
Protein sequence
MLRIDLILTE QGLAKSRSQA QTFISEGRIS YKQNEKWIKV TKPSLKLPSD IELNVISDEA 
DKYVSRGALK LEGALLHTKL NIEGFLVLDI GQSTGGFSDC AIQHGAAHVV GVEVGHDQLD
PRLRNHQNII CLEGINARNL SVEDLNEHFP EHGFDLIVMD VSFISQTKIL PQLPNLLSKT
GHLITLVKPQ FEVGKEFIGK GGIVKDKQRV KLLEQDMQDF VKRLGFEVKC YIESPIKGGD
GNQEFLLWAT RS