Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3472 |
Symbol | |
ID | 5366560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3915217 |
End bp | 3916230 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640805844 |
Product | thiamine ABC transporter, periplasmic binding protein |
Protein accession | YP_001342310 |
Protein GI | 152997475 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAATCAT TTTCGTTAAC TTCTCTTTTT TCTGCGGCTG TTGTGAGTCT TGGCGTAGTT CTTTCGCCTG TAGCATTGGC GACAGAGACT CTGAATGTAT ATACCTATGA TGCGTTTGCA TCCGACTGGG GCCCAGGCCC GAAGATAAAA GCTAATTTCG AAAAAGAATG TGCCTGTGAA GTGAATTTTG TCGCGTTGGA CTCTTCGGTT GGTATTTTGT CTCGTGCGCA GCTAGAAGGT AAATCGTCAC AAGCTGATGT ACTTTTGGGG CTAGACCTAA ATCTAATGGA AGCTGCAAAA CAGACAGGTT TGTTGGCGGA TCATTCTGTT GATACATCAG CTGTTACTAT TGCTGGTGGC TGGTCGGATA AAATCTTCGT GCCCTTTGAT CAAGGCCACT TCGCTTTTAT TTATAACTCT GAAACGCTTC AAAATCCACC AGCTAGTTTG AAAGAGGTGG TGGATAATCA AGATCTACGA GTGATTTATC AGGATCCAAG AACAAGTACG CCAGGACTTG GTTTGTTGTT GTGGATGAAA TCTGTTTATG GCGAAAACGC GACTGATGCT TGGGAGCGTC TTGCTTCGCA TACTGTAACC GTTACCAAAG GCTGGTCTGA TTCCTATAGT TTGTTCTTAA AAGGCGAGGC TGATGTGGTT TTGAGTTACA CCACATCACC GGCTTATCAT ATTGTTGCGG AAGGGGATGA TAAGTACAAA GCTGCTACAG CCACTGAAGG CCTTTATCCA CAAATCGAAG TGGCAGCGAT GATGAAAGAT GCGCCAAACC CGGCTTTGGC GAAGCGCTTT ATGCAGTTTA TTTTGCAGCC AGGTTTCCAA TCAACAGTTG CAACAGGGAA TTGGATGTTA CCCGTGGTTA AGCTAGATGA AAAATTACCA GCGGCTTTTG ACAGTGCTTT AAAACCGGTT AAGAGTTTAG TCTTGCCAGC AAAAGACGTG GCGCAACATC GCAAAGCTTG GATTGATGAG TGGTTAAATG CCACGACTCG ATAA
|
Protein sequence | MKSFSLTSLF SAAVVSLGVV LSPVALATET LNVYTYDAFA SDWGPGPKIK ANFEKECACE VNFVALDSSV GILSRAQLEG KSSQADVLLG LDLNLMEAAK QTGLLADHSV DTSAVTIAGG WSDKIFVPFD QGHFAFIYNS ETLQNPPASL KEVVDNQDLR VIYQDPRTST PGLGLLLWMK SVYGENATDA WERLASHTVT VTKGWSDSYS LFLKGEADVV LSYTTSPAYH IVAEGDDKYK AATATEGLYP QIEVAAMMKD APNPALAKRF MQFILQPGFQ STVATGNWML PVVKLDEKLP AAFDSALKPV KSLVLPAKDV AQHRKAWIDE WLNATTR
|
| |