Gene Mmwyl1_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3472 
Symbol 
ID5366560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand- 
Start bp3915217 
End bp3916230 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content44% 
IMG OID640805844 
Productthiamine ABC transporter, periplasmic binding protein 
Protein accessionYP_001342310 
Protein GI152997475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCAT TTTCGTTAAC TTCTCTTTTT TCTGCGGCTG TTGTGAGTCT TGGCGTAGTT 
CTTTCGCCTG TAGCATTGGC GACAGAGACT CTGAATGTAT ATACCTATGA TGCGTTTGCA 
TCCGACTGGG GCCCAGGCCC GAAGATAAAA GCTAATTTCG AAAAAGAATG TGCCTGTGAA 
GTGAATTTTG TCGCGTTGGA CTCTTCGGTT GGTATTTTGT CTCGTGCGCA GCTAGAAGGT 
AAATCGTCAC AAGCTGATGT ACTTTTGGGG CTAGACCTAA ATCTAATGGA AGCTGCAAAA 
CAGACAGGTT TGTTGGCGGA TCATTCTGTT GATACATCAG CTGTTACTAT TGCTGGTGGC 
TGGTCGGATA AAATCTTCGT GCCCTTTGAT CAAGGCCACT TCGCTTTTAT TTATAACTCT 
GAAACGCTTC AAAATCCACC AGCTAGTTTG AAAGAGGTGG TGGATAATCA AGATCTACGA 
GTGATTTATC AGGATCCAAG AACAAGTACG CCAGGACTTG GTTTGTTGTT GTGGATGAAA 
TCTGTTTATG GCGAAAACGC GACTGATGCT TGGGAGCGTC TTGCTTCGCA TACTGTAACC 
GTTACCAAAG GCTGGTCTGA TTCCTATAGT TTGTTCTTAA AAGGCGAGGC TGATGTGGTT 
TTGAGTTACA CCACATCACC GGCTTATCAT ATTGTTGCGG AAGGGGATGA TAAGTACAAA 
GCTGCTACAG CCACTGAAGG CCTTTATCCA CAAATCGAAG TGGCAGCGAT GATGAAAGAT 
GCGCCAAACC CGGCTTTGGC GAAGCGCTTT ATGCAGTTTA TTTTGCAGCC AGGTTTCCAA 
TCAACAGTTG CAACAGGGAA TTGGATGTTA CCCGTGGTTA AGCTAGATGA AAAATTACCA 
GCGGCTTTTG ACAGTGCTTT AAAACCGGTT AAGAGTTTAG TCTTGCCAGC AAAAGACGTG 
GCGCAACATC GCAAAGCTTG GATTGATGAG TGGTTAAATG CCACGACTCG ATAA
 
Protein sequence
MKSFSLTSLF SAAVVSLGVV LSPVALATET LNVYTYDAFA SDWGPGPKIK ANFEKECACE 
VNFVALDSSV GILSRAQLEG KSSQADVLLG LDLNLMEAAK QTGLLADHSV DTSAVTIAGG 
WSDKIFVPFD QGHFAFIYNS ETLQNPPASL KEVVDNQDLR VIYQDPRTST PGLGLLLWMK 
SVYGENATDA WERLASHTVT VTKGWSDSYS LFLKGEADVV LSYTTSPAYH IVAEGDDKYK 
AATATEGLYP QIEVAAMMKD APNPALAKRF MQFILQPGFQ STVATGNWML PVVKLDEKLP 
AAFDSALKPV KSLVLPAKDV AQHRKAWIDE WLNATTR