| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3458 |
|---|
| Symbol | |
|---|
| ID | 5367318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 3901557 |
|---|
| End bp | 3902309 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640805830 |
|---|
| Product | K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| Protein accession | YP_001342296 |
|---|
| Protein GI | 152997461 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000183907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA AAAAACTGTC AACAAGAAAA ATATCAGAGG TTTACAAGAG GTTGTTTTTA
AATCAGTGCT ATATCTGCAA TATAAAATGC CAGAGCTCAC TTTGCCACCC ATGCCACAAA
GGATTTCCAG CCAACCTAAA GCACTGCCAG CACTGCAAAC GCCCAACCAA TAGAAACCAT
GTTTCATGCG GCCAATGCCA AACCAACCCT CCACCTTATC GAACATGTAT TGCTCCTTAT
CGATTCGAAG GAATCATAAA AACCTTGATA CACAGCATCA AATTCAATCA AGGAACCCAC
TACATACGGC CACTCATGTA TCGATTAAGC AAACACCTCA TCGAATCATA TTCACCGGAG
AACTGGCCAG AACAAATAGT TTATGTACCA AGTCATCCAA GCCGAATCAA GGAGCGAGGA
TTTTGTCAAA CAAGGGCCAT GACCATTCAA CTAAGGAAAA ACCTCAAAGA AATTCTGGAT
GAAAAATGCC CTGCCCTTCC TAAACATAAC CCACTCAAAA AAATCAAAAA CACCCAAGCT
CAGCACTCAT TAAGCCGAAA AGAGCGACTA AAAAGCCCTC GAAGTAGCTA TCAGCTTGAT
GGACCTATAG CCAAGCATGT CGCCTTATTT GACGATGTAA TGACCACAGG AAGTACAATA
GAAAATTGCA CTAAATTGCT ATTAAAAGCA GGCGCAGAAC GAGTTGATAT CTGGGTCATT
GCCCGAACAC CGGATAAAGA ACACCAATCA TAA
|
|---|
| Protein sequence | MDWKKLSTRK ISEVYKRLFL NQCYICNIKC QSSLCHPCHK GFPANLKHCQ HCKRPTNRNH
VSCGQCQTNP PPYRTCIAPY RFEGIIKTLI HSIKFNQGTH YIRPLMYRLS KHLIESYSPE
NWPEQIVYVP SHPSRIKERG FCQTRAMTIQ LRKNLKEILD EKCPALPKHN PLKKIKNTQA
QHSLSRKERL KSPRSSYQLD GPIAKHVALF DDVMTTGSTI ENCTKLLLKA GAERVDIWVI
ARTPDKEHQS
|
|---|
| |