| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3448 |
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| Symbol | fliF |
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| ID | 5367082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3891697 |
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| End bp | 3893373 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805820 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001342286 |
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| Protein GI | 152997451 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG TCCCTGCAGA ACAATCGGAG CAAAAGCTCT ATTTAGAGTT AGTTACAGGC
TTTAATAAGC TGACGGTGAT TCGTCAGCTT GCATTAATGG TCGGTTTGGC CGCATCTATA
GCAATTGGTT TAGCTGCAGT ATTATGGAGC AATGGTCCGG ATTATAAGCC AGTATTAAGT
AGTATTACCG ATTACAATGC CGACCAAATC GTAGAAATCC TCAGTGTAAA TAATATTCCT
TTTAAGTTGG ATCAAAATAC AGGCGCTTTG CTTGTTGAAT CTGATTTTTA TCATCAAGCT
CGCCTTAAAT TAGCTGGCTC CGGCATTGTT TCCGACAATA TTGTTGGTAT GGAAATAATG
GATCAGGAGC AAGGTCTTGG TACGTCACAA TTTGTAGAAA CAACGCGTTA TAGGCGAGGC
CTAGAAGGTG AGTTAAGTCG AACCATTGCC AGTCTGCAAA GTATTAAAAG TGCTAGAGTG
CATCTGGCAA TACCAAAGGA GTCGGTTTTT GTTCGTGATA CTCGAAAGCC TTCTGCTTCT
GTGTTTTTAG AGCTTTATCC AGGAAGGCGT TTGGATAAGA GTCAGGTAGA AGCTATTGTG
AATTTGGTGG CTTCTAGTAT TTCTCAGTTA AGCGATAAGG ATGTCACTGT TGTTGATCAG
CGCGGTACAT TGTTGACAGA AAAAGACTCG GATTCTGAAT TATCTGTTGC TGGTAAACAG
TTTGATTACG CTCGTAAAGT TGAAGAAGTG TTACTGCAGC GAGTGAATAA TATTCTCGGA
CCTGTTATCG GCCAGGGGCG TTTTAAAGCT GAAGTGTCAG CAGATGTCGA CTTCACAGCT
GTTGAAAAAA CTAATGAGCA ATATAACCCT GATTTATTGG CTTTGCGCAG TGAGCAGACC
TTAAGAGAAA ATAGAAGTGC AGGCACGAGT GCGAGCGGCA TTCCTGGTGC GCTGACCAAT
CAGCCTCCTG GTGCAGTGAC TATCCCAGAG GCTGTAGATG AAAACGGTGC GCCAATAGGT
GGGAATACAT CAGCTAAAAA TGGTCAATCT CGCGAAGAAA CAACACGTAA CTTTGAGTTA
GACCGAAGCA TTAGTTATAC CAAACGCCAA CAAGGCATGG TGAGGCGCTT GTCTGTTGCG
GTTGTTGTTG ATGATTTAAT GAGTTTGAAT CCAGATACCT CAGCCATTGT TAGAACGCCT
TGGAATGATG ATGAGTTGGG GCGCTTAACC TTATTGGTCC GCGATGCGGT AGGGTATGAT
CCATCGCGTG GTGATAGTGT AAGCGTGATT AATTCGCCTT TTGCTTTACC TGATCCTGAA
GAGCCTGCTA TTGAGTTGCC ATTTTACCAA CAAGCATGGT TCCTTGGGTT AATACAACCG
ACATTGGTTG GTATATTTGT TCTGATCTTA TTGCTGGTGG TTGTTCGTCC AATTTTGAAA
ACCCTCAGTG AACAGAATAA AATTGCAGTT ACTGAAGACA CTGAGGCTGC TATATTCTCT
GATGAAACGG ATGAGATTTC AGACGATCAA GTATCTCTTG TTAGTGCAGA AGATATATTG
GTGCCTGGCT CTCCTGAAAA AATTGATCGC CAATTAAATG CAATTCGCGG TTTGATAGCA
GAAGAACCGG AGCGTGTTGC TCAAGTCGTT AAACAATGGG TAATGGAAAG CAAATGA
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| Protein sequence | MDNVPAEQSE QKLYLELVTG FNKLTVIRQL ALMVGLAASI AIGLAAVLWS NGPDYKPVLS
SITDYNADQI VEILSVNNIP FKLDQNTGAL LVESDFYHQA RLKLAGSGIV SDNIVGMEIM
DQEQGLGTSQ FVETTRYRRG LEGELSRTIA SLQSIKSARV HLAIPKESVF VRDTRKPSAS
VFLELYPGRR LDKSQVEAIV NLVASSISQL SDKDVTVVDQ RGTLLTEKDS DSELSVAGKQ
FDYARKVEEV LLQRVNNILG PVIGQGRFKA EVSADVDFTA VEKTNEQYNP DLLALRSEQT
LRENRSAGTS ASGIPGALTN QPPGAVTIPE AVDENGAPIG GNTSAKNGQS REETTRNFEL
DRSISYTKRQ QGMVRRLSVA VVVDDLMSLN PDTSAIVRTP WNDDELGRLT LLVRDAVGYD
PSRGDSVSVI NSPFALPDPE EPAIELPFYQ QAWFLGLIQP TLVGIFVLIL LLVVVRPILK
TLSEQNKIAV TEDTEAAIFS DETDEISDDQ VSLVSAEDIL VPGSPEKIDR QLNAIRGLIA
EEPERVAQVV KQWVMESK
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