Gene Mmwyl1_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3415 
Symbol 
ID5365415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3859085 
End bp3859699 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID640805787 
Productheme exporter protein CcmA 
Protein accessionYP_001342253 
Protein GI152997418 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAATCAT CTGCTTCTTT AACAATATCA GACCTTTGGA TTGAACGTGG AGAGAGGGAC 
CTATGTAAAG GGTTGTCTTT TAGTGTTCAG CCCGGTGAAG TCGTGCGTAT CCTTGGAGCA
AATGGGGCCG GTAAGAGTTC TTTGTTAAAA GTCATCGCTG GTGTGCTTTC TCCTCTAGAA
GGAAAAATAT TGTATTCGGG TGAGGATGTC ACCTTAGACA GAACTTCTTT ACAGCAAGAT
GCAATTTATC TTGGTCATTC TGTTGGTGTT AAAGGCCTGC TCACTGTTGC TGAAAATCTT
CGTTGGTATT GTCCTGATAT TTCTACAAGT ATTTTGTATT CAGTGTTAAC TCAGTTAGAC
CTTATAGATC TGGTCGATGT GTTGGTGAAA AAATTATCCG CAGGCCAAGC TCGACGAGTC
GCTCTGGCGC GGTTATGGCT AACTAAAAAA ACACTATGGC TGTTGGATGA ACCCTTTGCT
TCTTTAGATG TCGGAGGAGT TGCCCTGCTA GAGGAGCGTA TTCAACAGCA TGTGTTGTTA
GGTGGCTTGG TGATATTAAC TACCCATCAA GACTTGATGT CTATTACTCC TCATGACGTA
GTGTTGTTGT CATGA
 
Protein sequence
MQSSASLTIS DLWIERGERD LCKGLSFSVQ PGEVVRILGA NGAGKSSLLK VIAGVLSPLE 
GKILYSGEDV TLDRTSLQQD AIYLGHSVGV KGLLTVAENL RWYCPDISTS ILYSVLTQLD
LIDLVDVLVK KLSAGQARRV ALARLWLTKK TLWLLDEPFA SLDVGGVALL EERIQQHVLL
GGLVILTTHQ DLMSITPHDV VLLS