| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3405 |
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| Symbol | |
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| ID | 5365081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3849774 |
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| End bp | 3851792 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640805777 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001342243 |
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| Protein GI | 152997408 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.558724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATC AGCAGATGCT GGACTTGATT CAGCAACTTA ATGATTACAG CTATGCTTAT
CATGTAAAAG ACGAACCAAT TGTTCCAGAT GCAGTATACG ACCGTGATTA TCGTCAGCTT
CAATCTATAG AAGCCGAGCA TCCAGAATGG ATTCAAGCGG ATTCTCCAAC CCAGCGAGTT
GGTGAAAAGC CAGACAGCGG TTTTACTAAC GTTGCTCACA CTGTGCCTAT GTTGTCTTTA
GACAATGCCT TTGATAACGA GTCTTTGGCT GATTTTGACC AACGAATTCG TAAATTACTT
AATGCCGAGC AGGTGACCTA TTGTTGCGAA CCCAAACTGG ATGGTTTAGC CATTAGTCTG
CGTTATGAAG AGGGGCGCTT AGTAAGAGGG GTAACGCGCG GTGATGGTTT GTCTGGTGAA
GATATTACTT CGAATATCAA AACGATTTAT TCCGTCCCTT TAAAGTTGCG TACTAAAACA
CCACCAGCAG TATTAGAAGT TCGTGGCGAA ATCTATATGC CAAAAGAAGG CTTTGAAAAA
CTGAATGCCT TGGCGGTTGA ACAAGGTGAA AAGACCTTTG TTAACCCTCG CAATGCGGCT
GCTGGGAGTT TGCGTCAGCT TGATCCTAAA GTAACGGCTA AGCGTCCTCT TGTTATGTGT
GCTTACTCCA TTGGTTATGT AGAAGGTTGG GAGCAGCCAG AAAGCCATTA CGCAGGTTTG
TTGCAGTTAA GCGAGTGGGG CTTTCGCACC AATGATTTGA TGATAACAGC GGAAGGGGCG
CAAGGTTGTA TCGATTACTA CGAGAAGCTT AATGAAAAAC GTGCCAGTTT GTCTTATGAC
ATTGATGGTA TTGTTTATAA AGTTGATCAA ATTGCGCTGC AAAACCAATT GGGTTTTATT
GCGCGTGCTC CGCGTTGGGC CATCGCTAGA AAATTTCCTG CTCAGGAAGA GATGACTCGT
ATTTTAGGGG TGGATTTTCA GGTCGGTCGT ACCGGTGCGA TTACCCCAGT AGCGCGATTG
GAGCCTGTGT TTGTTGGTGG AGTGACGGTT TCTAATGCGA CTTTGCACAA CAAAGACGAG
ATTGCTCGAT TGGGTGTGAA GGTGAATGAT TTTGTTATTG TTCACCGCGC GGGAGACGTG
ATTCCTAAGG TGGTTCAAGT TGTCATTGAT AAGCGTCCGG AAAACGCGAC AGAGGTTGTT
TTTCCTGAAG CTTGTCCTGT TTGTGGTTCT GATTTAGAGC AGGTTGAAGG TGAAGCTGTT
ATTCGCTGTA CTGGTGGCTT GGTTTGCGGC GCGCAGTTAA AAGAATCCCT AAAGCATTTT
GTTTCGCGTA AAGCGATGGA TATTGATGGC CTTGGCGATA AGCTGATTGA GCAGCTGGTG
GATCAGCAGT TGGTTAAAAC GCCCGTTGAT ATTTTTACTT TGAGCGAGAA AAAAGACACC
TTATTGTCTA TGGAACGAAT GGGGCAAAAG TCAGTTGAAA AGCTTCTTGC TTCTATTGAA
ATCGCAAAGA GTACTCAATT TAATCGTTTT ATCTATTCCT TAGGTATTCG TGAAGTGGGT
GAAGCAACGG CTCGTGCTTT GACCAGCTAC TTTACTGAAT TGGATGACTT GATGGCGGCA
GATCAAGAAA CCTTGGTAGA GGTGGAAGAT GTTGGCCCCA TTGTAGCTCA ACACGTGCGT
TTGTTTTTTG ATCAGGAATT AAATCGAGAT ACCATTAAAG GCTTGTTAGC TGCTGGGGTT
GTTTGGGAGA AGAAGCAGCA AGTTTCAGCT GATGAGTTAC CCTTGTCTGG TAAAACCTAT
GTGGTAACGG GTTCATTAAG CCAATTTAGT CGCGATCAAG TAAAAGACAA ATTACAAGCA
CTAGGTGCCA AGGTTAGTGG TTCAGTCTCT GCGAAAACAG ATTGTTTAGT TGCCGGCGAA
AAAGCAGGGT CGAAACTTAC CAAAGCACAG TCTTTAAACG TGCCTATTAT TGATGAAGCG
GGTGTGATCG CTTTGCTCAC TGAACATGGA GCGATCTAA
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| Protein sequence | MTHQQMLDLI QQLNDYSYAY HVKDEPIVPD AVYDRDYRQL QSIEAEHPEW IQADSPTQRV
GEKPDSGFTN VAHTVPMLSL DNAFDNESLA DFDQRIRKLL NAEQVTYCCE PKLDGLAISL
RYEEGRLVRG VTRGDGLSGE DITSNIKTIY SVPLKLRTKT PPAVLEVRGE IYMPKEGFEK
LNALAVEQGE KTFVNPRNAA AGSLRQLDPK VTAKRPLVMC AYSIGYVEGW EQPESHYAGL
LQLSEWGFRT NDLMITAEGA QGCIDYYEKL NEKRASLSYD IDGIVYKVDQ IALQNQLGFI
ARAPRWAIAR KFPAQEEMTR ILGVDFQVGR TGAITPVARL EPVFVGGVTV SNATLHNKDE
IARLGVKVND FVIVHRAGDV IPKVVQVVID KRPENATEVV FPEACPVCGS DLEQVEGEAV
IRCTGGLVCG AQLKESLKHF VSRKAMDIDG LGDKLIEQLV DQQLVKTPVD IFTLSEKKDT
LLSMERMGQK SVEKLLASIE IAKSTQFNRF IYSLGIREVG EATARALTSY FTELDDLMAA
DQETLVEVED VGPIVAQHVR LFFDQELNRD TIKGLLAAGV VWEKKQQVSA DELPLSGKTY
VVTGSLSQFS RDQVKDKLQA LGAKVSGSVS AKTDCLVAGE KAGSKLTKAQ SLNVPIIDEA
GVIALLTEHG AI
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