| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3241 |
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| Symbol | |
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| ID | 5368397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3676445 |
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| End bp | 3678268 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640805616 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_001342082 |
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| Protein GI | 152997247 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0161382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00210477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCCATT CAGAATTTGA TCCGAAGCAT TTTGTCAGCA ATTTAACCAC ACGTCCGGGC
GTTTATCGCA TGTACGACGT GAAAGGTGAG TTGCTTTATG TTGGAAAAGC AAAGAATCTA
AAAAATCGTG TCGCGAGCTA TTTCCGTGTG ACCGGATTAA CGACTAAAAC CATGGCTTTG
GTTAGTCGTA TTCACACCAT TGAAATCGCT GTTACTAAAA GCGAAACGGA AGCTTTACTT
CTTGAGCAAA CGCTTATTAA ACAACATCGT CCACCGTACA ATATTTTGCT ACGGGACGAT
AAATCTTATC CTTATATTTT GTTATCGAAT CACCCTCATC CGGCTTTGCT GTTTCGTCGC
GGTGATAAAG CTGATAAAGG TACCTTGTTC GGTCCCTTTC CAAGTGGCAG CGCCGTAAAA
GAAAGTTTGA ATACCATGCA AAAGGTTTTC AAGGTGCGCC AGTGCGAAGA CAGTACCTAC
TCGAATCGAT CTCGGCCTTG TTTGCAATAT CAAATTAAGC GTTGTTCTGG GCCTTGTGTG
AACTTGATTA GTGATGAAGA GTACGAGCTA GATGTTCGTC ACGCACGCAT GTTTTTACAA
GGCAAAGATC AAGAACTCAC CGCTGAAATT ACCACGCAAA TGAGTGCTGC TGCCGCAGAT
ATGGAATTTG AGCGAGCCGC CGAGCTACGA GATCAAATCA TTCAGCTCAA GCACATCCAA
GAACAGCAGC ATGTTTATGG GCAAACGGGT GAAGCAGACG TCATTGCCTC TATAATTCAG
CCCGGTGGAT TATGTGTTCA TGTGATGATG GTGCGTAAAG GCAAAGTCGT TGGAAGCAAA
AGCTATTATC CAAAAATGCC GATCGAAATC ACAGAAGGCG AATTATTATC ATCTTTTATC
GCTCAATTTT ACTTAGGTGG TATTCAAGAG TTACCTAAGA CGCTTATCAT TAGTCATGAG
CTAGAAGATG GTGATGCGCT GGTGGAAGGT ATTTTCGAAA CCACCCAGAA AAAAATTGAA
GTGCTAAGCA ATGTCAGAGG TCAGCGTGCC CGTTGGTTGG AACTTGCCAA ACTCAACGCA
GAGCAAGGTT TACAGGCTCG ATTATCGGAC AAGCGTAATC ATTTTAGCCG TATAACCGCG
TTGCAAAAAT TGTTAGGCTT CTCTGAACCG CCAATGCACA TGGAATGTTT TGATATTAGT
CATTCTAGTG GCGAAGCTAC GGTAGCCTCT TGTGTGGTGT TTGGGCCTGA TGGGCCGGAT
AAAAAGCGCT ATCGCTCCTT TAACATCGAA GGTGTCGAAC CGGGTGATGA TTACGGTGCC
ATGAAGCAAG CACTCACTCG ACGCTATAAA CGCGTCAAAA GTGGTGAGCT AGAAGCGCCA
GATGTGTTGC TTATTGATGG TGGTAAAGGT CAGTTAACTC AAGCTGAAAC TGTATTAAAA
GAATTGGGAT TAGTGAATAT CTTCTTATTG GGGGTCGCAA AAGGCGATAC TCGTAAGCCG
GGTCTTGAAA CCTTATATAT CGGCTCCAAA GAAGATGAAG TTGTGTTGCC TCCAGATTCG
GCTGCATTGC ACTTGATTCA ACATATTCGC GATGAAGCGC ACAGATTTGC GGTCAAGAGC
CATCGCCGTA GACGAGACAA GAAGCGTCGG CACTCGGTAT TGGAAGATAT TCCAGGTATC
GGGCCAAATC GACGTAAAGA GTTGCTGACG GCCTTTGGTG GATACCAAGA GCTACTATCA
GCGAGCCAGG AAGATATTTC AAAGGTGAAA GGGATTAGTG CCAAAAAAGC GGAAGAAATT
TATCTCTACC TTCATAAAAG TTAA
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| Protein sequence | MSHSEFDPKH FVSNLTTRPG VYRMYDVKGE LLYVGKAKNL KNRVASYFRV TGLTTKTMAL
VSRIHTIEIA VTKSETEALL LEQTLIKQHR PPYNILLRDD KSYPYILLSN HPHPALLFRR
GDKADKGTLF GPFPSGSAVK ESLNTMQKVF KVRQCEDSTY SNRSRPCLQY QIKRCSGPCV
NLISDEEYEL DVRHARMFLQ GKDQELTAEI TTQMSAAAAD MEFERAAELR DQIIQLKHIQ
EQQHVYGQTG EADVIASIIQ PGGLCVHVMM VRKGKVVGSK SYYPKMPIEI TEGELLSSFI
AQFYLGGIQE LPKTLIISHE LEDGDALVEG IFETTQKKIE VLSNVRGQRA RWLELAKLNA
EQGLQARLSD KRNHFSRITA LQKLLGFSEP PMHMECFDIS HSSGEATVAS CVVFGPDGPD
KKRYRSFNIE GVEPGDDYGA MKQALTRRYK RVKSGELEAP DVLLIDGGKG QLTQAETVLK
ELGLVNIFLL GVAKGDTRKP GLETLYIGSK EDEVVLPPDS AALHLIQHIR DEAHRFAVKS
HRRRRDKKRR HSVLEDIPGI GPNRRKELLT AFGGYQELLS ASQEDISKVK GISAKKAEEI
YLYLHKS
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