Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3221 |
Symbol | |
ID | 5368186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3651758 |
End bp | 3652936 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640805590 |
Product | TPR repeat-containing protein |
Protein accession | YP_001342062 |
Protein GI | 152997227 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0588004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCGAAA TTGGGTTGTT TTTGGTTCTT TTTGTCGCGC TCTTCGTTGG CTGGGCAATG GGGCGTAAAA ATCCGACCAA GAAAAATAAA CAGGTTAAAA AAAATATTCC GACGGACTAT TTTCGAGGCC TTAATCATTT ACTTAACGAT CAACATTCAG AGGCTATTGA TGCTTTTGTT GATTCCTTAG AAGTTAATTC CGATACTTTT GATATTCATC TAACACTAGG CAATTTATTT CGTAAAAAAG GTGAAATACA AAAAGCAATT AACATCCATC AAAATTTACT TGCTCGCCCC GAAATATCTC AGCGTGAAAT GCGTATGGTG CAGTTAGAGT TGGCCAGTGA TTTTATGTCG GCAGGTTTGT TGGATAGAGC GGGTCGCTTG TTATTAAATA TGGCGTCCAC ATCACGAAAA AGTGAGTTTC AACCTAAGAT ACTTACCTTG CTCGTGGACC TTTATGAATT TGAGCAAAGC TGGGATAAGG CTATTCAAAT TGGCTCTGAA TTGATAAAAG AAACGCCAAC CAAGAAAGAG ATTAAACGCT TAGCGCATTT TCATTGTGAA ATGGCGCAAG AGCTTCAAAA GAAAGAGCAG TGGAAGCAGG CCTTCCAACA TTATAAAGAT GCCTTAGATG TAGATTCTAG TTGTGTTCGA GCAAGTATTG GTGCTGCTGA TGTATTAAAT AGCCAGGGCC GTTATCGTGA TGCGATTAAA GAGCTAAAGC ATGCTGCGGA GCAAGATCCA GAATTCATTT CAATCATTAT TCCCAAGTTA AAAGAGTGTT ATCAAAAAGT ATGGGGTAGT GGGGGATATA TTAAATTCTT ACAAGAACAG AACCAGAAAA AACCTTCTAC AGCGTTGATT ATGGCGCTTG TTCAGCATTA TATGGAAACA GATAAAGATT ATGCTGAAAT GTTTTTGGTT GAGCAGTTAA GGCAGCACCC AACAATTAAA GGCTTTAAAG AGCTAATTAG CTTGCAGCTT GCAGATTCTC AAGGGTACAA CCAGCAACAT TTGGTGGTTC TCTTTGAGCT GATTGATCAG CTGGTTCAAG CAAAACACAA ATATCAATGC CGCCAGTGCG GTTTTCCAGG TCATCAACTG CATTGGCAGT GTCCAAGTTG TAAAAATTGG GGCATGGTGA AGCCGATTCA TGGATTGGAA GGCGAATAA
|
Protein sequence | MTEIGLFLVL FVALFVGWAM GRKNPTKKNK QVKKNIPTDY FRGLNHLLND QHSEAIDAFV DSLEVNSDTF DIHLTLGNLF RKKGEIQKAI NIHQNLLARP EISQREMRMV QLELASDFMS AGLLDRAGRL LLNMASTSRK SEFQPKILTL LVDLYEFEQS WDKAIQIGSE LIKETPTKKE IKRLAHFHCE MAQELQKKEQ WKQAFQHYKD ALDVDSSCVR ASIGAADVLN SQGRYRDAIK ELKHAAEQDP EFISIIIPKL KECYQKVWGS GGYIKFLQEQ NQKKPSTALI MALVQHYMET DKDYAEMFLV EQLRQHPTIK GFKELISLQL ADSQGYNQQH LVVLFELIDQ LVQAKHKYQC RQCGFPGHQL HWQCPSCKNW GMVKPIHGLE GE
|
| |