| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3180 |
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| Symbol | |
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| ID | 5369009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3603798 |
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| End bp | 3604700 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640805550 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001342023 |
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| Protein GI | 152997188 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | [TIGR02297] 4-hydroxyphenylacetate catabolism regulatory protein HpaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG AATGGATACC CAACATAACC ATTGGACAAG ACTATGATGT AGCCTATAGA
GATGCGACGA TCCATTTTGA TGTACTCGGA AAAATGGCGG ATTTCTTTGG CCGTGATATG
CCAATGCATT TACATGCAGA ATATTGCCAA ATACATCTTA TTTTATCTGG TAATACTTTG
TTTAATATTG ATCAAAATGT CTATGAAACA CAAAGCTGTG CCGCTTTCTA CACACCACCA
GCCACGCCAC ATGCGTTTCT AACCGAGCCG ACTGCACCTG GCTATGTCAT TACTATTCAC
AACACCCACT TACAGAAAAT CATGGCTGAG CTTAATGCCT ACAGTCACCA CAATTCGCTA
TTAATGCCAT TTCACATTGA TCAACAAAAA GACACCAAAC CTGAGCAACA ACACTGGGAA
CAGCTATTAA ACCTTTTTGA GATGCTTAAG CTAGAATGGA GTCGGTCTTC CCTGTATCAG
CACAACAGCA TTGAAGCCAT TGTGAAGTTG ATTTTGATCA GTATGCTCAG ACTTTCCGGT
ACTGAGCAGC CACAAAAACA ACATAACCAA TCCGAAATTC TCTGTTTTAG AGAATTTAGC
ACCCTGCTGG AACATCACTT TTTAACCGAA AAAAACATTC AATTTTATTG CGAAGCGCTT
CAAATCAATG AAAGCAGACT GAATTATTTG TGCAATAAAA TCACCAAGCT TAGCCCCAAA
AAAATGATAA ATGGCCGAAT TCTTCTCGAA GCCAAACGCT TATTGTCCCA TACCAATAAA
AACCTAACTG AAATCGCTTA TACCTTGGGC TATATCGACC CTTCATATTT CTCACGATTC
TTCTTAAAAA AGACGGGAAT GAGTCCTTCA GATTTTCGCA AACACTACCG TAACGAGGAA
TAA
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| Protein sequence | MKKEWIPNIT IGQDYDVAYR DATIHFDVLG KMADFFGRDM PMHLHAEYCQ IHLILSGNTL
FNIDQNVYET QSCAAFYTPP ATPHAFLTEP TAPGYVITIH NTHLQKIMAE LNAYSHHNSL
LMPFHIDQQK DTKPEQQHWE QLLNLFEMLK LEWSRSSLYQ HNSIEAIVKL ILISMLRLSG
TEQPQKQHNQ SEILCFREFS TLLEHHFLTE KNIQFYCEAL QINESRLNYL CNKITKLSPK
KMINGRILLE AKRLLSHTNK NLTEIAYTLG YIDPSYFSRF FLKKTGMSPS DFRKHYRNEE
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