| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3179 |
|---|
| Symbol | |
|---|
| ID | 5368062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 3602774 |
|---|
| End bp | 3603580 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640805549 |
|---|
| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| Protein accession | YP_001342022 |
|---|
| Protein GI | 152997187 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTC CTAAAAATAC ATTTAAAACT GCGCTACAAA ACCGCCAACC TCAGATTGGT
CTGTGGCTTG GTTTAGCAAA TAACTACACC GCTGAACTGA TTGCGAGCGC AGGATTTGAT
TGGTTATTAA TCGACGGAGA ACACGCACCA AATACTTTGC AGACCATGGT TGGGCAACTG
CAAGCGATCG CGCCTTTTTC TAGCCATCCA ATTGTTCGTC CAGCCTGGGC TGATCATGTC
GCGCTTAAGC AAATACTTGA TCTTGGTGTG CAAACCGTCC TAGCACCTAT GGTAGATAAT
GCTGAGCAAG CGCTGGAGAT AGTCAAAGCA ACACGCTATC CACCAGCTGG TATTCGTGGT
GTCGGCAGTG CACTAGCACG TGCCTCGCAG TTCAATAGAA CACCCGAATA CTTGACGACT
GCGAACGATG AAATTTGTGT ACTGGTTCAA ATTGAGTCTC TTCGTGCTGT TGAAGAACTG
GATAACATTC TTGCTGTAGA TGGGGTTGAC GGTGTCTTTA TTGGACCTGC GGACCTTAGC
GCATCACTTG GCTATATTGG TCAACCTAAC CATCCTGAAG TGGTTAAAGT GATAGAGCAA
AGTATTGCAA AAATTGTTGC AGCTGGAAAA GCACCAGGCA TTTTGATGGC AGACAAAGTA
CAAGCGAAAC ATTACTTGTC ACTCGGCGCA TTATTTGTCG CAGTAGGCAG TGATACTGGC
TTACTAATGA ACAGTACTAA AGTTTTGGTG AATGAGTTCA AGCCTGAACA ACATTCCCAT
GAAGAAACAA CAGCGTCTGT CTATTGA
|
|---|
| Protein sequence | MAAPKNTFKT ALQNRQPQIG LWLGLANNYT AELIASAGFD WLLIDGEHAP NTLQTMVGQL
QAIAPFSSHP IVRPAWADHV ALKQILDLGV QTVLAPMVDN AEQALEIVKA TRYPPAGIRG
VGSALARASQ FNRTPEYLTT ANDEICVLVQ IESLRAVEEL DNILAVDGVD GVFIGPADLS
ASLGYIGQPN HPEVVKVIEQ SIAKIVAAGK APGILMADKV QAKHYLSLGA LFVAVGSDTG
LLMNSTKVLV NEFKPEQHSH EETTASVY
|
|---|
| |