| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3177 |
|---|
| Symbol | |
|---|
| ID | 5366861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 3601181 |
|---|
| End bp | 3601942 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640805547 |
|---|
| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit |
|---|
| Protein accession | YP_001342020 |
|---|
| Protein GI | 152997185 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00918982 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG CCCGTATACT TTTTAACAAT GAAACACTCG CTGTCACAGT AAACGATCAA
GACCAAGTTG TGACTCAACA AGGCAAGATC CTTGAAGAAG GTTCTTTCAC TTGGTTACCA
CCATGCGAAG GCAAAATATT TGTTTTAGCG ATTAACTACG CTGACCACGC TGCCGAATTG
TCTTTTAAAG CACCAGACGA GCCTTTGGTT TTTTTGAAGA ACAAAAACTC CCTTATCGGT
CACGATCAAC AAACCTACCG TCCAGATAAC GTGGATTACA TGCACTATGA ATGTGAGTTG
GTGGTGGTTA TCGGCAAAGA AGCGAAAAAC GTCTCATTAG AGGACGCGAT GGACTATGTC
GGTGGTTACA CAGTAGGAAA TGACTACGCC ATCCGAGATT ACCTAGAAAA TTACTACCGC
CCTAATCTAA GAGTAAAAAG TCGCGATACT TGTACGCCAA TTGGCCCCTA CATTGTGGAT
GCCAAAGACA TTAAAAATCC GCACAATCTG GTGCTTCGCA CTTATATAAA TGGCGAATTG
AAGCAAGAAG GCAACACCAG GGATTTAGTG TTTAACATCC CACATTTGAT CGCTTACTTG
AGCGAGATTA TGACATTAAC CCCAGGGGAT ATGATTTTTA CCGGAACCCC AGAAGGTTTA
GCCGATGTGA AACCTGGCGA TGTGGTAACC ACAGAAGTCG AAGGTGTGGG CGTTCTGAAA
AACACCATTA TTTCTGAATC TGAATACCTA AAAACAATTT AA
|
|---|
| Protein sequence | MKSARILFNN ETLAVTVNDQ DQVVTQQGKI LEEGSFTWLP PCEGKIFVLA INYADHAAEL
SFKAPDEPLV FLKNKNSLIG HDQQTYRPDN VDYMHYECEL VVVIGKEAKN VSLEDAMDYV
GGYTVGNDYA IRDYLENYYR PNLRVKSRDT CTPIGPYIVD AKDIKNPHNL VLRTYINGEL
KQEGNTRDLV FNIPHLIAYL SEIMTLTPGD MIFTGTPEGL ADVKPGDVVT TEVEGVGVLK
NTIISESEYL KTI
|
|---|
| |