| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3172 |
|---|
| Symbol | |
|---|
| ID | 5366553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3596384 |
|---|
| End bp | 3597406 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640805542 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_001342015 |
|---|
| Protein GI | 152997180 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00138054 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTA AAAAGATTTT TTCTATTGCT GTAGCAACCA CTTTGTCTAG TATGACATTT
GCAGAAACAA TCCGTGTTGC AAGTTGGCTG CCGCCAACGA ATCCTATGAA CCAAGTTGTT
ATCCCTGCGT GGGGTAAAGC CATTTCTGAT GCCACTGATG GACGAATCAA TGTCGAGATC
GTTTATGGTT TAGGTCATCC GAAAACCATG TGGAATCTGG TAGAAGACGG CATTGTTGAT
GCCAGCTATA GCTACCATGG TTATGCTCCA GGTCGCTTTG AGTTACCACA AGTGGTGGAA
CAACCAGGAC TGGGAACGAA TGCAGAAGCC GCGTCTTATG CCTTGTGGAC GACGTACGAA
AAGTTTTTTT CTAACTCTCA CGAATTCGAT GGCTTAAAAC TACTGGCGTT ATTTACCCAC
GGCCCAGGCC AAATCCATTC CAATTTCCCA GTTAATTCTC TTGCAGATCT TAAAGATAAA
AAGATCCGCA TTGGCGGCGG TGTACAAAGC ATTATTGCGG AGAAATTTCA CGTGACAACC
GTGGGGGCTC CCGCACCAAA AGTCTATGAA ATGATGCAGC AAGGGGTTAT TGATGGGGCG
TTTTTACCTG CGGTAGAGCA GAAAGTCTTG CGTCTTTCCG AAGTGACTAA GTATTTGACC
ATTTTCCCAG ATGGCCTTTA CATGGGCAGT TTCTCTATGT TCATGAACCC TGATGTTTTT
GAAGACCTAG ATAAGGATGA TCAAAAAGCG ATTAACGATG CCTCTGGTGA GGTGTTATCT
ATTTTAGCGG GTAAAGCGTG GGATGAAAGT GATGCTGCAG GGATAGAATC GGCACGTGAA
AATGGGGTTA CTGTCACAAC CTTGTCGGCG AACGATGCAC TTGTTAAAGA GGTTGAAGCG
ACCTTGTCTG ATGCCAGTGA TAGCTGGATT AAAGCCGCCG ATGACAAAGG TTATGACGGC
AAAGAAGCGC TGACATTTCT GCGCGATACC GCCCATCAGT ACGCAGATAA GCACGGAGAA
TAA
|
|---|
| Protein sequence | MSLKKIFSIA VATTLSSMTF AETIRVASWL PPTNPMNQVV IPAWGKAISD ATDGRINVEI
VYGLGHPKTM WNLVEDGIVD ASYSYHGYAP GRFELPQVVE QPGLGTNAEA ASYALWTTYE
KFFSNSHEFD GLKLLALFTH GPGQIHSNFP VNSLADLKDK KIRIGGGVQS IIAEKFHVTT
VGAPAPKVYE MMQQGVIDGA FLPAVEQKVL RLSEVTKYLT IFPDGLYMGS FSMFMNPDVF
EDLDKDDQKA INDASGEVLS ILAGKAWDES DAAGIESARE NGVTVTTLSA NDALVKEVEA
TLSDASDSWI KAADDKGYDG KEALTFLRDT AHQYADKHGE
|
|---|
| |