| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3120 |
|---|
| Symbol | |
|---|
| ID | 5364770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3534406 |
|---|
| End bp | 3535632 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640805492 |
|---|
| Product | ribulose-bisphosphate carboxylase |
|---|
| Protein accession | YP_001341965 |
|---|
| Protein GI | 152997130 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000815521 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATA GATTTGAGGT TACGTACTTA ATTCATAGTT TCATCAGTTT AGCTCAAGTT
GCTGAGAAAA TTTGCAATGA TCAAACAACT GGAACTTTTA CGAAAATTCC AGATATCTCA
AGTCGTAATG TGGGATGCTT TTCGGCTGAA GTTATTTCTA TAGAAGAAAG CTTTGTTTCA
TCATTAAAGC AATATCGTGG TCGTGTGATT ATCTCTTACC CTATTGATTT ATGCGGATAT
GACTTGTCTG CTATTTTCAC AATTGCTTGT GGTGGGGTCT CATCTATTAA GGTGATTGAG
CGTTTAAAAA TAGCAGACAT TCAATTCACC GATCAATTTG TTGCTCACTT TCAAGGTCCA
AAATTTGGTA TTGAAGGTAC TTATCGCAAA TTGGGAATGT CAGAAGGTCC AGTGATCGGT
GGGATCTTAA AACCGAATAT TGGTATCACA CCAGCAGACA GCGCAAATCT GGTTGAACAA
CTGGTGGCTG CTGAAATTGA TTTCATTAAA GACGATGAGA AACTACAAAG TCCGCCATAC
TCTCATGTAA AAGATCGCAT CGACGCTATT ATGCCTGTTA TTGATGATTG GCAGCAGAAA
AGTGGTAAGA AAGTTATTTA TGCATTTAAC ATTTGTCATT CAGATATTGG TGAAATTGAA
CGTAATCATG AGTATTTGAA AAGCAAAGGC GGTGATGCTG CTGTTATAAA CGTCAATCAA
ATAGGTATTT GCGGTTTAGA TTCAATTAAT AAGTTTAGTG ACGTTATTTT GCATGCTCAT
ACTAATGGGC TGGCTTTTAA TGAGCGCAGC GATTGGGGGA TTTCTTTCAA TGTTTGGCAA
AAAGTTTGGC GTCTATTAGG CATAGATCAT CTTCAAATTA ATGGTATTGA TGGGAAGTAT
TGGCAAGGTA ATGATTCCGT GATGGAGGCT TATTATGCAA TGACTCAACC TCTTGGCCAT
TTATCTGCAA CTTTACCTGT TTTTTGCTCC GGTCAGTGGG GTGGTCAGGT GCCAGAAACC
TACAATCGAA CAGGTAAATC TACAGAACTA ATGTATCTCG GCGGTGGTGG TATACATGGT
CATCCATTGG GTGCTCAGGG TGGAGTAAAA GCCATTAGAC AAGCTTGGGA TTCCTGTATC
TCAGGTCAAA ATATACATGA TTATGCTGTG ACTCATCCTG AGTTATCGCA GGCATTATCG
TATTTTTCTC ATAAAGCAAA ACAATAA
|
|---|
| Protein sequence | MMDRFEVTYL IHSFISLAQV AEKICNDQTT GTFTKIPDIS SRNVGCFSAE VISIEESFVS
SLKQYRGRVI ISYPIDLCGY DLSAIFTIAC GGVSSIKVIE RLKIADIQFT DQFVAHFQGP
KFGIEGTYRK LGMSEGPVIG GILKPNIGIT PADSANLVEQ LVAAEIDFIK DDEKLQSPPY
SHVKDRIDAI MPVIDDWQQK SGKKVIYAFN ICHSDIGEIE RNHEYLKSKG GDAAVINVNQ
IGICGLDSIN KFSDVILHAH TNGLAFNERS DWGISFNVWQ KVWRLLGIDH LQINGIDGKY
WQGNDSVMEA YYAMTQPLGH LSATLPVFCS GQWGGQVPET YNRTGKSTEL MYLGGGGIHG
HPLGAQGGVK AIRQAWDSCI SGQNIHDYAV THPELSQALS YFSHKAKQ
|
|---|
| |