| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3116 |
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| Symbol | |
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| ID | 5368294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3530674 |
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| End bp | 3531942 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640805488 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001341961 |
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| Protein GI | 152997126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.827435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000905066 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAACAG TCATTGTTTC GCTATTGCTT ACATTCATTT CATTATCTGT GCCTATTGCC
GTCGCTATTG TTATTGCGTC AGCAGTAGGG CTTTATTTTT TCAGTAACCT CCCATTAATT
ATCATTCCAC AGCGAATGTT TATTGGTTTA GATAGCTTTC CATTAATGGC AGTTCCTTTA
TTTATTCTCG CCGGAAATAT TATGGGGCAA GGAGGGGTTT CAAAACGTTT GGTAACTTTT
GCCAAATCTC TTGTGGGCAA CCTTCAGGGT GGTTTAGCGA TTTCTTGTGT TATAACCAGT
ATGATTTTTG CTGCCGTATC TGGATCAAGT GTTGCGACAG CATATGCTGT AGGGGCGATC
TTGCTTCCAG CGATGATAGC ACATGGTTAT CCTAAACCTA TGGCGACGGC GATTCAGGCG
TCTTCTGCGA ATTTGGGAAT TGTTATTCCT CCATCTGTGC CATTAATTAT GTATGGTGTT
AGCACTAATA CATCGATAGG TAAGCTCTTT CTTGCTGCAA TAGGCCCAGG TCTGCTTATG
GGTATTGCCC TTATTATCAT GGTTATTGTT TGGTGTATTG TGACTGGACA TGGCAAAAAT
GATGCAAATG ATCAACAGAG TTTATTGGCT TCATCAAAAG ATGCTTTACT GGCTTTGCTA
ATGCCTACCA TGATTCTTGG TGGAATTTAT GGCGGTGTTT TCACCCCAAC TGAGGCTTCA
GCTATCGCTG TTATTTATGG GCTGATACTG GGCGTTTTTG TTTATAAAGA AATCTCGTTT
AAAGATATAC CAAGGATACT TAAAGGCTCT GTGGTATCAA CGTCTTCTGT GATGCTAATT
ATTGCGGCAG CTTCATTGTT AAGTTTTCTT GTGAGTCGGT CCGATTTGCC TCAGCTACTT
TCTACTTTTG CTACGGATAA CTTTTCGACT AAGTTACAGT TTTTCTTAGC GGTTAATTTG
TTGCTTTTAG TTGTTGGTAT GTTTGTTGAA ACCTCTGCTT CGATTTTACT ACTTGCACCT
ATATTTGCCC CCATTGCTAT TATTTATGGT ATTGATCCTG TTCATTTTGG TGTGGTGATG
GTTGTAAACT TGGCCATAGG TATGTTTACC CCTCCACTTG GGGTAACCTT GTTTGCTGCG
AGCCAAGTGG CTGAAATCCA GGTTGAAAAA GTCATATTAG CGACGTTGGT ACCTTTAGGA
ACTTTGCTCT GCTGCTTGGT TCTTATTACA ATATTTCCTT CGATTACACT ATTTTGGGTG
AATTCGTGA
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| Protein sequence | MPTVIVSLLL TFISLSVPIA VAIVIASAVG LYFFSNLPLI IIPQRMFIGL DSFPLMAVPL
FILAGNIMGQ GGVSKRLVTF AKSLVGNLQG GLAISCVITS MIFAAVSGSS VATAYAVGAI
LLPAMIAHGY PKPMATAIQA SSANLGIVIP PSVPLIMYGV STNTSIGKLF LAAIGPGLLM
GIALIIMVIV WCIVTGHGKN DANDQQSLLA SSKDALLALL MPTMILGGIY GGVFTPTEAS
AIAVIYGLIL GVFVYKEISF KDIPRILKGS VVSTSSVMLI IAAASLLSFL VSRSDLPQLL
STFATDNFST KLQFFLAVNL LLLVVGMFVE TSASILLLAP IFAPIAIIYG IDPVHFGVVM
VVNLAIGMFT PPLGVTLFAA SQVAEIQVEK VILATLVPLG TLLCCLVLIT IFPSITLFWV
NS
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