| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3105 |
|---|
| Symbol | |
|---|
| ID | 5366836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3519323 |
|---|
| End bp | 3520327 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640805477 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001341950 |
|---|
| Protein GI | 152997115 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0253563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000776541 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGT TTGCTGCGCT AGCTGGAGTA TCTCGTCCTA CGGCCTCTAA ATATTTTGAA
AAAAAAGACG CCGTTAGTCC TCGATCAAGA ATGAAAATTG AGGCAATGCT AAAAGAAGTG
GATTACCGTC CAAATCTTTT GGCGTCGCGC TTAATGCGTA AAGATTCGAA GATAATAGGA
GTGTTAATTC CTTCTTTAGG GGATCCTTTT TATGCCTCTA TTGTACGCTC GGTTGCCATG
AACGCGTTGG CTTATGGCTA CTCAGTGATG ATTGAGTGTT CTTATGGTGA TCCTGCTCTT
GAATCTAAGG CTATTGAAAA CTTTCTTTCG GTGAAAGTGG CTGGGATTTG CTATGCGCCA
TCCGGGATTC GACAAGTTGA AAAAAAGCTT CATAGAATCC AGATGGAGTT GCCTTTGGTG
TTTATTGATG CTGTTTTTGA AGGGGCCAAT TACAGCGTCA GAAATAACAA TAGGCAAACA
ATTGGTCTTA TTACAGATTA CATGCTTGGG GCGGGGCGAC GTCCCGCTTT TTTCCCTATG
CCGAATGTAA ATAGCAATGC TCAGGAACGT TTGGACGTGT ACCTCGACAC GATGAAAGCC
AGTGATGAGT CGCCTATCAT CCTTCCTGTT GGGCAAAGTT TGCGTTGGGA TTTTGAAGAG
TGGGCGCGAG AAGAAGCTTT ACGCATGATT AGATCTAATC AATTGGATGG TGATGCCATT
ATATGTGCCA ATGATCGGGT GGCATTTGGG GTTATTTCAG CAATGTTTTC AGAAGGTTTG
ATAACATTTA AGGATCAAAA TGCCTTGAGT ATTTCAATAT CAGGTCATGA TAATCAGCCT
TTGAGTAAAT TTACTTGTCC ACCATTAACG ACGGTTGAGC AGGATGTAGA AAACATAGGT
AAATGTGCTA TTGATATGAT TATGAGCTTA ATAGGTGTCA TTTCAGATGA AATAGAGAAT
CATATCAAGC TGGACGGCCG ATTGATTATT AGAGAGTCTG CTTGA
|
|---|
| Protein sequence | MEEFAALAGV SRPTASKYFE KKDAVSPRSR MKIEAMLKEV DYRPNLLASR LMRKDSKIIG
VLIPSLGDPF YASIVRSVAM NALAYGYSVM IECSYGDPAL ESKAIENFLS VKVAGICYAP
SGIRQVEKKL HRIQMELPLV FIDAVFEGAN YSVRNNNRQT IGLITDYMLG AGRRPAFFPM
PNVNSNAQER LDVYLDTMKA SDESPIILPV GQSLRWDFEE WAREEALRMI RSNQLDGDAI
ICANDRVAFG VISAMFSEGL ITFKDQNALS ISISGHDNQP LSKFTCPPLT TVEQDVENIG
KCAIDMIMSL IGVISDEIEN HIKLDGRLII RESA
|
|---|
| |