Gene Mmwyl1_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_3081 
Symbol 
ID5367750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp3494250 
End bp3495212 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID640805453 
Productpyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_001341926 
Protein GI152997091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0664641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATT ATCCAACCAT TGAGGACATT AGAGAAGCCC AAAAGCGGCT AGAGCCTCAT 
ATCAAACACA CCCCTCTGTT GCGTGCGGAA AAGATAGAGT TGAGCCTTGG TTGCCAACTT
TATCTTAAGC CCGAAAACTT GCAGATTACG GGAGCATTCA AAATTCGTGG CGCGCTAAAT
AAGACGCTTT CTATGTCAAA AGAAGAAATT GCTAATGGCA TTATTGCTAC GTCATCGGGC
AATCATGCGC AAGGTTTGGC TTATGCTGCC AGAATGTTGG GAGTAAAAGC TATATTAGTT
CTGCCAGTGA CTACGCCTAA AATTAAAATT GAGAACACCA AAGCGCTGGG GGCCGAAGTA
GTTCTTTTTG ATGGGGACAC GGCTGCTCGG TGGAAAAGGG TTTATGAAAT TGCCGAAGAA
AACCAATATG TCCCAGTTCA TGCTTTTGAA GATCCGCTAG TGATGGCGGG GCAGGGCACA
ATTGGTTGTG AAATACTGGA GGATTTAGAG GATGTGGATA CCGTAATTAT CCCTATGGGG
GGTGGCGGAC TTATTTCTGG TATTGCAACG GCCATCAAAG AAATTAACCC GTCCGTGCGT
GTTATCGGTG CCGAGCCGGC ATTAACCCCA AAGTATTATT ACAGCCGAAT CAATAAAGAA
CGAACCACGT TGCCCCTAAA AAATACCATT GCTGATGGGT TAAGAATCAG TGTTCCTGGG
CAAAATCCTT ATCCTATTAT TGAAAAGTAC GTTGACGAAA TTATCTTGGT GGATGATGAG
CATATTATTG CTGGGATGCG TAGCCTTGCT AAAGACGCCA AATTGATTGC TGAGCCAGCC
GCTTCCATTG GAGTGGGTGC GCTATTGTCA GGTGCTGTTA AACTTAAACC AGATGAGAAA
GTGTGCGTGG TATTGACTGG CGGTAATTGG GATTTAGCCG ACCTTGCTGA TATATATAAG
TAA
 
Protein sequence
MRDYPTIEDI REAQKRLEPH IKHTPLLRAE KIELSLGCQL YLKPENLQIT GAFKIRGALN 
KTLSMSKEEI ANGIIATSSG NHAQGLAYAA RMLGVKAILV LPVTTPKIKI ENTKALGAEV
VLFDGDTAAR WKRVYEIAEE NQYVPVHAFE DPLVMAGQGT IGCEILEDLE DVDTVIIPMG
GGGLISGIAT AIKEINPSVR VIGAEPALTP KYYYSRINKE RTTLPLKNTI ADGLRISVPG
QNPYPIIEKY VDEIILVDDE HIIAGMRSLA KDAKLIAEPA ASIGVGALLS GAVKLKPDEK
VCVVLTGGNW DLADLADIYK