Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3070 |
Symbol | |
ID | 5366393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3481052 |
End bp | 3481447 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640805442 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001341915 |
Protein GI | 152997080 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.362329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0397869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATC TAGTGGAAAT TTTGCCAGCA AATATCCTAA GCGAAAATAC CATTATTTGC CTTAATGAAT CGGCCTCTCA GTCGATAGCA AAAGCCAAAG CATATATTGA TCAGCATTAT AAAGAGTCTA TTGATTTAGA CTCTTTAGCT GCTCTAGTAG GGTTAACTCG CTTTAGTTTG GCAAAGCGGT TTCGTCAGCT TGTGGGCGTT TCTCCCTATC AATATGTTTG CCGAGTGCGT GTTTGTAACG CTCAGTTTTT GATTGAGCAA GGCAAACGAC CTACCGAAGT TGCTGGAGCG GTGGGCTTTT TTGATCAGAG TCATTTGGCT AAGCACTTTA AGCGTTTATG TGGTGTGACA CCTAGCCAAT ACAGAGAACG CTTTTGTAAG GCTTAG
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Protein sequence | MEDLVEILPA NILSENTIIC LNESASQSIA KAKAYIDQHY KESIDLDSLA ALVGLTRFSL AKRFRQLVGV SPYQYVCRVR VCNAQFLIEQ GKRPTEVAGA VGFFDQSHLA KHFKRLCGVT PSQYRERFCK A
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