Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3059 |
Symbol | |
ID | 5364976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 3453906 |
End bp | 3456170 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640805431 |
Product | xylan 1,4-beta-xylosidase |
Protein accession | YP_001341904 |
Protein GI | 152997069 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0195747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAAAAC CAACAACCAA ATCCATGGGG CATTTATTGC TCCTCAGTAG TGCGACAGTA CTGCTAACGG GCTGCGTTAC TAGCCCTCAA GGCAATTTCA CCGAAAATGC TAATATCAAA CAAACTAACT TAGTAAGCAA AATCAAACCT AAGTTATCTA TTGATGGCTT AACATTTAAA GACCTAAATC AAAATGGCCA CCTAGACCCA TATGAAGATT GGCGTCTCCC GACACAGCTT CGAGTCAATG ACCTAATCAG CCAAATGACA CTACAAGAAA AAGCGGGCTT AATGCTAATT GATACTCTAA ACAGCGGCTG TGAAGGCTTG CCGCAAGACA CCGCAGAGCA CTATATAAAA AAGCAAGAAA TGCGCCGTTT TATCTTTCGC AACGTAGTCA CTAACGATAA CAGATGTGGA CCAGATCGAG GTATTTTTGC AGGATCATCC TTAACACCTG CAGAATCCGC GTTCTATATG AACCAAATCC AAGAAATGGC TGAAAACAGC CGTTTAGGCA TTCCTGTTTT ACAGAAATCC AATGCACGAA ACCATTTTGA TAAAGACCCG AAAGTGGGTA TTAATGAAGC TGCTGGCGCA TTTACCCAAT TCCCTAAAGA GCCAGGTTTA GCCGCAGCAG TTTTGGGCGA AGAAGCACTT CACCCAGGAA AAGGCATGGA GATAATTAAA ACCTTTTCAG AAGTAACTGG CAGCGAGTGG CGCTCTATTG GACTTCGCGG TATGTACGGT TACATGGCAG ACCTTGGTAC CGAACCTCGC TGGCACCGTT TCCATGAAAC ATTCACTGAA AATGCTGACC TTGATGCGAG CATCATGACT GAATTAGTAA AAGGTTTGCA AGGTGGGCCG GTCAATCCAG ATACCAATAT TGCTTTAACA CTTAAACATT TCCCAGGCGG TGGTCCACAG GAAATGGGAC TAGATCCGCA CTATTCCTTT GGTAAAAATC AAGTCTATCC AGCTGGGCAG TTTGAAGAGC ACCTTAAACC TTTCCAAGCA GCAATTGATG CTGGTGTCTC TTCTATCATG CCTTACTATG GAGTCCCGAT TGACGTTGTC CACAATGGTG TGAAGTATGA GCAGCTAGGT TCATCATTCT CTAAACAAAT TGTTACTGAT TTATTACGTG GCGAGCTGGG ATTTAAAGGT TATGTGAATA CTGACACAGG AATAGTTGAT GCTAGAGCCT GGGGATTGGA AGATAAAACT GTGCCGGAAC GTGTCGCCCA GTCTATCAAA GCCGGGGCCG ATACTATTTC TGGATTCCAC GATGTGAAAA CCATTACAGA CTTGGTGGAT CAAAAACTAC TGACAGAAGC TCGTATCAAT GAATCTGCAA AACGTCTATT AGCACCTATG TTTAATTTAG GTTTATTTGA AAACCCTTAT GTAACAAGCG ATTTGGCTCA ACACATCATA GGCAATGAAA ACCATCAGAA TAAAGCCATG GATATTATGC GAAAGTCCAT TGTTTTACTG CAAAATAATA ACCTATCTGA CAACACTAAA GTGCTACCAA TTAAACACGG CGCTCACCTT TATGTTATGG GTATGGCACC AAAAGACGTT AAATCATATG GCTATAACGT TGTTAATGGA GAACCAACAG ACACCAATGG CAAGGCTCTA CCAAGGCCAA GCGCAAAAGG CAGTGACTAT GCTTTAATCA GAGTCGAAGT CAAAAATGCC AGTCCGTTAT TACGTAGCTA TCGTTCAAGA GATGCGGCTA CAGGAAATAA CCCAAAACTG ATCAATCCAC TTACAAATCA AACATGGGGA GCAGAAGATC CATGCAATAT GCATCCAGAC ATTAATCGTT TGTGTGTTGA TGATATGTTT GGGCTAGGAT TAATATTTGG TGGCGCTGTT CCATGGGAAG TAAATAACCT TTCTTTTACT AGCATGGCCG CTTCCGATTC GTGGAAAATC TCACCATCTT TAGAAGAGAT ACAAGCTGTG ATGAAAGAAG TCGGTGCCGA AAACACCATT CTTAACATCT ACTTTCGTAA TCCTTATGTA CTCGATGAGG CAAGTGGCTT GAAAAAAACT GGCGCTATTT TGGCAGGCTT TGGAGTCAAC AACAAAGCAC TTATGGACGT TATCTCCGGA CGTTTTTCAC CACAAGGCAA GCTACCATTT GCTCTACCTA ATAACCTAAC CGCTGTCATT GAAAACGAGC CAGATGCACC AGGCTACGCG AAAAAAGACA CCTTGTTTGA TTACAATTTT GGCTTAACTT ATTAG
|
Protein sequence | MIKPTTKSMG HLLLLSSATV LLTGCVTSPQ GNFTENANIK QTNLVSKIKP KLSIDGLTFK DLNQNGHLDP YEDWRLPTQL RVNDLISQMT LQEKAGLMLI DTLNSGCEGL PQDTAEHYIK KQEMRRFIFR NVVTNDNRCG PDRGIFAGSS LTPAESAFYM NQIQEMAENS RLGIPVLQKS NARNHFDKDP KVGINEAAGA FTQFPKEPGL AAAVLGEEAL HPGKGMEIIK TFSEVTGSEW RSIGLRGMYG YMADLGTEPR WHRFHETFTE NADLDASIMT ELVKGLQGGP VNPDTNIALT LKHFPGGGPQ EMGLDPHYSF GKNQVYPAGQ FEEHLKPFQA AIDAGVSSIM PYYGVPIDVV HNGVKYEQLG SSFSKQIVTD LLRGELGFKG YVNTDTGIVD ARAWGLEDKT VPERVAQSIK AGADTISGFH DVKTITDLVD QKLLTEARIN ESAKRLLAPM FNLGLFENPY VTSDLAQHII GNENHQNKAM DIMRKSIVLL QNNNLSDNTK VLPIKHGAHL YVMGMAPKDV KSYGYNVVNG EPTDTNGKAL PRPSAKGSDY ALIRVEVKNA SPLLRSYRSR DAATGNNPKL INPLTNQTWG AEDPCNMHPD INRLCVDDMF GLGLIFGGAV PWEVNNLSFT SMAASDSWKI SPSLEEIQAV MKEVGAENTI LNIYFRNPYV LDEASGLKKT GAILAGFGVN NKALMDVISG RFSPQGKLPF ALPNNLTAVI ENEPDAPGYA KKDTLFDYNF GLTY
|
| |