| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3040 |
|---|
| Symbol | |
|---|
| ID | 5365330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 3434825 |
|---|
| End bp | 3435742 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640805413 |
|---|
| Product | catechol 1,2-dioxygenase |
|---|
| Protein accession | YP_001341886 |
|---|
| Protein GI | 152997051 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.567946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTA AAACAATTCA AACAGAAGCA GTACAAACGT TATTGAAAAA AGTGGCTGGC
TTGGACAAAG AACAAGGCAA CCCACGTATG AAGGAAATCA TTTTGCGTTT AGTGTCAGAC
ATCTATACGA TGATTGAAGA TCTAGATATT ACACCAGATG AATTTTGGCA GGGTGTGAAC
TATCTAAATG ACCTTGGTAC GACGAAAGAA GCCGTTTTGC TTGCACCAGG TTTAGGTTTT
GATCACTTCT TAGATATTCG TGAAGATGCG AAAGATGAAG CAGCAGGTCT AGCAGGTGGT
ACACCACGTA CTATTGAAGG CCCTCTATAT GTAGAGAATG CACCAATTTC TGAGGGTGAA
ACGCGCATGG ATGATGGTCA ATCTCCAGGC CAAGGCATGT GGCTTCACGG TAAAGTGGTG
GATGAAGATG GCAAACCTGT AGCGGGTGCT GTTGTTGACC TTTGGCATGC AGACTCTAAA
GGTGGTTACT CTTATTTTGA CCCAACACAA AGTGAATTCA ATCTACGTCG TAGAGTGATT
ACGGATGCAG ACGGTTGCTA CCGTGCTCGT AGTATCGTGC CAAACGGCTA CGGCGTTCCA
CCAGAAGGTA ATACCATTAA AGTACTTCAG AGCCTTGGCC GTCACGGTAA CCGTCCAGCT
CATATTCATT ACTTTGTATC TAAACCAGGC TACAAGCATC TAACAACACA GATTAACTTG
GCGGGTGATG CATACACTTA CGATGACTTC GCTTTTGCCA CTCGTAATGA ATTGGTTGTT
GATGCAACAC CAAAGAGTGA CAATGCACAC GGCTTTGACA GCGAATATTT GGACGTTGAA
TTCAATGTTG AAATCCTTAA AACGGACAAA GCAGAATTAG CAGATAAGCA TACTCGTGCA
CGTGCGTCAG TTGCTTAA
|
|---|
| Protein sequence | MTVKTIQTEA VQTLLKKVAG LDKEQGNPRM KEIILRLVSD IYTMIEDLDI TPDEFWQGVN
YLNDLGTTKE AVLLAPGLGF DHFLDIREDA KDEAAGLAGG TPRTIEGPLY VENAPISEGE
TRMDDGQSPG QGMWLHGKVV DEDGKPVAGA VVDLWHADSK GGYSYFDPTQ SEFNLRRRVI
TDADGCYRAR SIVPNGYGVP PEGNTIKVLQ SLGRHGNRPA HIHYFVSKPG YKHLTTQINL
AGDAYTYDDF AFATRNELVV DATPKSDNAH GFDSEYLDVE FNVEILKTDK AELADKHTRA
RASVA
|
|---|
| |