| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3026 |
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| Symbol | |
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| ID | 5367917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3419388 |
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| End bp | 3420707 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805399 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001341872 |
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| Protein GI | 152997037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.109071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA TCGAATTGGC CTTTTTAATG ATGGCTGTGC TGATGGTCTT AATGAGCATC
CGCATCCCGA TTGCATTATC TATGTTAGTG TGTGGTGCAT TTGGTTACGC CATGATAGGT
GGCTTCCCTG CTCTATTAGA ATATTTAGGC ACGGCGCCAG TATCAAAATT CTCCAGCTAT
GATCTATCGG TCGTCCCTCT TTTCCTACTT ATGGGCGAGC TGGCAACGCG TTCAGGTATT
ACAGCAGAAC TATTTAGAAC CTGTAATACT TGGATTGGCC GTCAACGTGG TGGTATTGCC
ATGGCAGCTA TTGCAGGTTG TGCAGCTTTT GGGGCTATTT GTGGATCATC ATTAGCAACC
GCATCCACTA TGGGAAAAGT GGCTCTTCCT GAAATGAAGC GACTCAATTA TTCTGGCAGC
CTTGCTGCTG GGGCACTCGC GGCAGGTGGA ACACTGGGAA TTTTGATTCC ACCCTCAATG
GTACTCATCA TCTTTGCGGT ACTGACTGAG CAAAATATTT CGAAAATGTT TATCGCTGCC
TTTGTACCAG GCTTTTTAGC AGCAGGCGGT TATATTCTTG CCATTGCTAT TTATGTGCGT
ATTTATCCTG AAGCTGGCCC ACGCGGTGAA AAAACCACCT TTGCGCAAAA GATAAAATCT
ACCAAAGACG TTTGGCACAT TACAGGGATT TTTCTCATTG TATTGGGCGG TATCTATCTA
GGGATTTTCA CTCCTACTGA GGCTGCATCT GTTGGTGTTA TTTTGACAGC AATCCTAGCA
TTCACTCATG GCAAAATGCG CCTAGATGGT TTGCTAGTCT GTCTTATGAA AACGGCCGTA
TCTTCTGCAA TGATCTTTTT CATTGTATTG GGCGCGGATC TTTTTAGTGT CTTTATCGCT
CTATCAAGAT TACCAGACTT GGGTGTGGAG CTTATTCAAA ACTCCGGGCT TTCGCCTTAT
ACCATCTTAG TCGTCATGCT TTTAACCTAT TTGGTTATGG GTTGTTTCTT AGACAGCTTA
GCAATGATAT TACTAACAAT TCCAATCTAC TTCCCAATGA TTATGGCAAT GGATTTTGGT
ATACCTCCGG CAGACTTAGG CATTTGGTTT GGTATACTCG CCTTGATCGT GGTTGAAGTA
GGGCTAATCA CTCCCCCTGT TGGTATGAAC GTATTTATCA TTAAGTCGTT TGATGATTCC
TTGAAGCTGA AAGAATGCTT TAAAGGCGTA ATTCCCTTCT TAATATCTGA CTTTGTCAGG
GTAGCCTTGT TAGTACTTTT CCCAAGTATC ACCCTCGGAC TGGTCCACCT AATTGCCTAA
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| Protein sequence | MSNIELAFLM MAVLMVLMSI RIPIALSMLV CGAFGYAMIG GFPALLEYLG TAPVSKFSSY
DLSVVPLFLL MGELATRSGI TAELFRTCNT WIGRQRGGIA MAAIAGCAAF GAICGSSLAT
ASTMGKVALP EMKRLNYSGS LAAGALAAGG TLGILIPPSM VLIIFAVLTE QNISKMFIAA
FVPGFLAAGG YILAIAIYVR IYPEAGPRGE KTTFAQKIKS TKDVWHITGI FLIVLGGIYL
GIFTPTEAAS VGVILTAILA FTHGKMRLDG LLVCLMKTAV SSAMIFFIVL GADLFSVFIA
LSRLPDLGVE LIQNSGLSPY TILVVMLLTY LVMGCFLDSL AMILLTIPIY FPMIMAMDFG
IPPADLGIWF GILALIVVEV GLITPPVGMN VFIIKSFDDS LKLKECFKGV IPFLISDFVR
VALLVLFPSI TLGLVHLIA
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