| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3010 |
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| Symbol | |
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| ID | 5365428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3398674 |
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| End bp | 3400797 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640805383 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001341856 |
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| Protein GI | 152997021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.783716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.957451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTT CATCGCAACC AACCGCACCT CAAGACATCA ATCTTGAAGA TTTTGAAACC
AAACATCGCT CTGGCCCTTG GCTAAACCGT TTTGTATTTG CCCTTTCGGT TTTCTTGGCA
GTTGCCCACA TTTACATTAA TACGATAGCC ACACTTCCAG AACTTTGGGT CTCTGCGTTT
CATTTTGCTG GATTCGGTAT CTTGTGTGCC TTGTTGATCC CAGCGAATCC TAAATGGCAA
GACAGTAAAA TCGCTCTATT TTTTGATGGG GCTATTGTAC TCGCCCTAAT CGGAATGGTG
CTCTACATTG TCTTTTTTGA AGATGCGCTA TACGCCCGCG GCGTAACTTT CAACACCTCA
GACTGGATAG TATCCAGCGT TGCTGTTTTA CTATCTCTTG AACTGATTCG CCGTACCAGT
GGTTGGTTTA TTCCCTTTCT CATTATCGTT GCACTAACCT ACGTTGTACT CTGGGGAAGC
TGGCTCGCTG GTATGTTTAA CTTCCCCGGA CTTAGCCTTG AAACCCTTTT GTATCGCAGT
TTTTTTAGCA CAGATGGCAT GTTTGGCTCC ATTTCTAGAA TCTCATGGAG CTTTGTCTTC
ATGTTTATTT TATTCGGCGC CTTTTTAGTA AAATCCGGTG CAGGTGATTT TATTATTGAT
CTGTCACGCT CGCTTGCTAG CAAAATGATC GGTGGCCCCG GTTTTGTGGC GGTATTAGGT
TCTGGCTTAA TGGGTTCTGT TTCTGGCTCG TCAGTAGCCA ACACTGTATC GACTGGTGTT
ATCACCATTC CACTGATGCG CAGAGCGGGC TTTCCAGCGC GTTTTGCTGC TGGCGTCGAA
GCTGCAGCGT CTACCGGTGG GCAATTGATG CCGCCAGTTA TGGGTGCTGG GGCTTTTATT
ATGGCTTCTT ATACACAAGT TTCTTACGTC ACCATTATTA GTGTGGCTGC CATTCCAGCG
CTTCTTTATT TCCTGTCCGT TGGTTTCTTC GTACGTGTCG AAGCAAAACG CAGTAAAGTT
ATCGCGACAG AAAGCGATGA TGCCGTCAAT ATTTCACAAG TCCTTAAAGA TGGCTGGCAT
CATATTGTGC CGCTTGGGGT TTTAGTAACC TTGTTAGTAC AAGGTTTTAC ACCAACATAC
GCTGCGGGTA TTAGTATTTT GGCGGTTATT GCTGCCTCCT TCCTTTCTAG CAAGCATAGA
ATGGGGCCGG CTGCGGTTAT CGATGCGATG GCTCAAGGCG CGAAGAACAT GTCTACCACT
GCGGTTCTAC TGGTAGGTAT TGGCTTAGTA GTTAACGTAA TTAGCACCAC TGGCGTTGGT
AATACTTTCT CTTTGTTAAT AACCAATTGG GCTGGTGGTA GTCTGTTCTT TACCATTATT
CTCGTTGCAA TTGCGTCTTT AATTTTAGGT ATGGGCTTGC CAGTAACGGC GTCTTACATC
GTGTTAGGAA CGCTATCGGC TCCAGCTCTA TTTAATCTCA TCGCAGAAAG CCAGCTCTTG
GATATGATGT CTTCTGGTAG TTTGCCTGAA GCCGCAAGCG CAGTATTCAT GCTGGTCGAT
CCTTCTGCTA TTGCTTCTTT AGCGCAAGGC ATGCCAATGG AACAAGCTCA AGCTTTATTG
GCACAAGTTC CTAACGATTT CAAAAGCATG TTGATGGATC AAGCCTTAGG TGCTCAGAGC
GTCGCGATGA TTTTGGTAAC AGCACACATG ATCATCTTTT GGCTTTCACA AGACAGTAAC
GTGACTCCAC CTGTATGTTT AACCGCTTTC GCTGCCGCCG CTATTGCTAA AACACCGCCG
ATGCTAACCG GTCTGACTGC ATGGAAACTA GCAAAAGGTT TGTACATTGT TCCACTATTA
ATGGCTTACA CTCCATTAAT AGGCGGTGAT ACAGAAACAC TATTGCGTCT GTCTTTCTTT
GCTATATTTG GTATGTATGC CTTAGTTGGA GCTATGGAGG GTTACTTAGA AGATAAGCTA
TCGATCTTTT CACGATTCAT TGCTTTAGCC GCTTCATTGA TGATGCTATG GCCACATTTA
GCGCTTTGGG TTAATTGTAT TGGCCTCGCT ATTTTCTTGG TACTCTTCGT CATAGGTAAC
AAGTCTTATA AGAAAAGTAT GTAA
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| Protein sequence | MTASSQPTAP QDINLEDFET KHRSGPWLNR FVFALSVFLA VAHIYINTIA TLPELWVSAF
HFAGFGILCA LLIPANPKWQ DSKIALFFDG AIVLALIGMV LYIVFFEDAL YARGVTFNTS
DWIVSSVAVL LSLELIRRTS GWFIPFLIIV ALTYVVLWGS WLAGMFNFPG LSLETLLYRS
FFSTDGMFGS ISRISWSFVF MFILFGAFLV KSGAGDFIID LSRSLASKMI GGPGFVAVLG
SGLMGSVSGS SVANTVSTGV ITIPLMRRAG FPARFAAGVE AAASTGGQLM PPVMGAGAFI
MASYTQVSYV TIISVAAIPA LLYFLSVGFF VRVEAKRSKV IATESDDAVN ISQVLKDGWH
HIVPLGVLVT LLVQGFTPTY AAGISILAVI AASFLSSKHR MGPAAVIDAM AQGAKNMSTT
AVLLVGIGLV VNVISTTGVG NTFSLLITNW AGGSLFFTII LVAIASLILG MGLPVTASYI
VLGTLSAPAL FNLIAESQLL DMMSSGSLPE AASAVFMLVD PSAIASLAQG MPMEQAQALL
AQVPNDFKSM LMDQALGAQS VAMILVTAHM IIFWLSQDSN VTPPVCLTAF AAAAIAKTPP
MLTGLTAWKL AKGLYIVPLL MAYTPLIGGD TETLLRLSFF AIFGMYALVG AMEGYLEDKL
SIFSRFIALA ASLMMLWPHL ALWVNCIGLA IFLVLFVIGN KSYKKSM
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