| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2975 |
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| Symbol | vmrA |
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| ID | 5366692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3361160 |
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| End bp | 3362539 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640805348 |
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| Product | multidrug efflux pump VmrA |
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| Protein accession | YP_001341821 |
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| Protein GI | 152996986 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0592966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG CTCCACAGGT TCAACCGTTA CAATCCGTCG CTGGTACGTT TTGGCGTTTT
GCCATTCCTT CCATTGTTGC TATGTTAGTT AGTGGTCTGT ATCAGATTAT TGATGGTTTT
TTCGTTGGTC ACTTTGTTGG TGCTGACGGA TTGGCTGGAA TCAATATGGC GATTCCCTTA
TTGGGCTTGA TCATGGGCTT TGGTTTGCTG GTAGGAATGG GCGGAGGCAG TGTCCTATCT
AACTATCGAG GTGAGAACAA CCTACCTGCC ACCCAAGCAA CCTTGGTCAC GTCATTGTGT
TTGATCATTT TGATTGGCTT ATTAGCTACC GTTGTTTTTA TCGCTTTTGG ACAAACCTTG
CTGAATTTGC AAGGTGCAAC GGGTGTGACG CTAGAGCTGA GCTGGAGTTA TGTGCAGACC
ATGTCATTTG GTGCGCTCAT TTCTATTGGT GCCAGTGCCA TGCCGATGCT TGTACGAAAT
GATGACAGCC CAAACCGCGC CACCGTGTTT ATTGTGGCTG GGGCTTTAAC TAACATAGTC
TTGGATTATA TCTTTTTAGG TTACCTTGAT ATGGGGCTGA GAGGAGCGGC TATCGCCACC
TTAATTGCTC AATCCATTAC CTGTATATTG TGTTTACGCT ATTTCACATC ATCCAAAGCG
AAAACTAAAC TGGCGCTCAA GCAGCTTGAT AAAGCCATTG CTATTCGTAT CGTGCAGCTA
GGATCATCCA ACTTAGTGAT GTTTATCTAT TTTAGCTTTG TTATGGCGTT CCATAATCTG
CAATTTATGA CCTATGGCAA CACCACACAA CTTGCGGCCT TTGCGATTGT TGGCTACCTA
GCAAGCTGTT ATTACTTCTT TGCCGAGGGG CTGGTGAGCG GTCTACAGCC ACCAGTGAGT
TATTATTTAG GGGCTAAACA ATACAATCGC ATTATCAAAA CAGTAAAACT GGCGTTTTCC
GTTACCGTCG GATCTGGTAT CGCACTGATT ATACTGCTGA ATCTGTTTCC AGAATTCTTT
ATCAGCGCCT TTGCCTCAGG AGACAGTGCT CTAGTTGCCG CAAGTAAAAA CGGCATTCGT
CTTCACCTAA TGGCATTGTT TTTAGACGGC TTCTTATTTA TGGCGTCCAT TTACTTCGTC
GCTGTTGGTA AAAGTGCCCA AGCATTATTT GTTTCGGTTG GTAATATCTT GATCCAGATT
CCGTTTCTAT TCGTTTTGCC AAAGTACCTC GGCATAGACG GTGTTTGGCT GGCTGTTCCT
TTATCCAACA TCGCCTTTGT TTTAATTGTA CTGCCGATGC TGTTGATCAA CCTGAAAGGA
TTGAAGAAAA TGCATAACCA ACAAAGTGAT ATTGCAGCAA GAGCGGTCGC TTATCAGTAA
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| Protein sequence | MQAAPQVQPL QSVAGTFWRF AIPSIVAMLV SGLYQIIDGF FVGHFVGADG LAGINMAIPL
LGLIMGFGLL VGMGGGSVLS NYRGENNLPA TQATLVTSLC LIILIGLLAT VVFIAFGQTL
LNLQGATGVT LELSWSYVQT MSFGALISIG ASAMPMLVRN DDSPNRATVF IVAGALTNIV
LDYIFLGYLD MGLRGAAIAT LIAQSITCIL CLRYFTSSKA KTKLALKQLD KAIAIRIVQL
GSSNLVMFIY FSFVMAFHNL QFMTYGNTTQ LAAFAIVGYL ASCYYFFAEG LVSGLQPPVS
YYLGAKQYNR IIKTVKLAFS VTVGSGIALI ILLNLFPEFF ISAFASGDSA LVAASKNGIR
LHLMALFLDG FLFMASIYFV AVGKSAQALF VSVGNILIQI PFLFVLPKYL GIDGVWLAVP
LSNIAFVLIV LPMLLINLKG LKKMHNQQSD IAARAVAYQ
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